Detailed information NTG0224301

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: B7L38_RS02795
• Genome accession: NZ_CP020578
• Coordinates: 484162..484863 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain SSA12
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 479162..489863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7L38_RS02765 (B7L38_02765)	-	479468..479911 (-)	444	WP_001246675.1	SRPBCC family protein	-
B7L38_RS02770 (B7L38_02770)	tadA	479981..480484 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
B7L38_RS02775 (B7L38_02775)	-	480491..481615 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
B7L38_RS02780 (B7L38_02780)	ung	481612..482325 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
B7L38_RS02785 (B7L38_02785)	-	482376..482972 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
B7L38_RS02790 (B7L38_02790)	gspK	483203..484162 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
B7L38_RS02795 (B7L38_02795)	xcpW	484162..484863 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
B7L38_RS02800 (B7L38_02800)	xcpV	484863..485243 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
B7L38_RS02805 (B7L38_02805)	-	485233..485787 (-)	555	WP_000841373.1	type II secretion system protein	-
B7L38_RS02810 (B7L38_02810)	-	485797..486405 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
B7L38_RS02815 (B7L38_02815)	-	486443..487216 (-)	774	WP_000497298.1	TatD family hydrolase	-
B7L38_RS02820 (B7L38_02820)	-	487234..487575 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
B7L38_RS02825 (B7L38_02825)	-	487587..488567 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
B7L38_RS02830 (B7L38_02830)	kdsB	488579..489340 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=224301 B7L38_RS02795 WP_000594589.1 484162..484863(-) (xcpW) [Acinetobacter baumannii strain SSA12]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=224301 B7L38_RS02795 WP_000594589.1 484162..484863(-) (xcpW) [Acinetobacter baumannii strain SSA12]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996