Detailed information NTG0224255

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: B6S64_RS04335
• Genome accession: NZ_CP020574
• Coordinates: 794599..795300 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 15A5
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 789599..800300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B6S64_RS04305 (B6S64_04305)	-	789905..790348 (-)	444	WP_001246675.1	SRPBCC family protein	-
B6S64_RS04310 (B6S64_04310)	tadA	790418..790921 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
B6S64_RS04315 (B6S64_04315)	-	790928..792052 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
B6S64_RS04320 (B6S64_04320)	ung	792049..792762 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
B6S64_RS04325 (B6S64_04325)	-	792813..793409 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
B6S64_RS04330 (B6S64_04330)	gspK	793640..794599 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
B6S64_RS04335 (B6S64_04335)	xcpW	794599..795300 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
B6S64_RS04340 (B6S64_04340)	xcpV	795300..795680 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
B6S64_RS04345 (B6S64_04345)	-	795670..796224 (-)	555	WP_000841373.1	type II secretion system protein	-
B6S64_RS04350 (B6S64_04350)	-	796234..796842 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
B6S64_RS04355 (B6S64_04355)	-	796880..797653 (-)	774	WP_000497298.1	TatD family hydrolase	-
B6S64_RS04360 (B6S64_04360)	-	797671..798012 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
B6S64_RS04365 (B6S64_04365)	-	798024..799004 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
B6S64_RS04370 (B6S64_04370)	kdsB	799016..799777 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=224255 B6S64_RS04335 WP_000594589.1 794599..795300(-) (xcpW) [Acinetobacter baumannii strain 15A5]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=224255 B6S64_RS04335 WP_000594589.1 794599..795300(-) (xcpW) [Acinetobacter baumannii strain 15A5]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996