Detailed information NTG0223613

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: CHELV3228_RS02175
• Genome accession: NZ_CP020478
• Coordinates: 411807..412541 (+)
• Length: 244 a.a.
• NCBI ID: WP_082199331.1
• Uniprot ID: -
• Organism: Campylobacter helveticus strain ATCC 51209
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 406807..417541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHELV3228_RS02145 (CHELV3228_0425)	-	406955..407980 (-)	1026	WP_082199327.1	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II	-
CHELV3228_RS02160 (CHELV3228_0428)	lon	408231..410606 (-)	2376	WP_082199328.1	endopeptidase La	-
CHELV3228_RS02165 (CHELV3228_0429)	bamD	410632..411279 (-)	648	WP_082199329.1	outer membrane protein assembly factor BamD	-
CHELV3228_RS02170 (CHELV3228_0430)	fliW	411418..411807 (+)	390	WP_082199330.1	flagellar assembly protein FliW	-
CHELV3228_RS02175 (CHELV3228_0431)	proC	411807..412541 (+)	735	WP_082199331.1	pyrroline-5-carboxylate reductase	Machinery gene
CHELV3228_RS02180 (CHELV3228_0432)	-	412538..412852 (+)	315	WP_082199332.1	type II secretion system protein	-
CHELV3228_RS02185 (CHELV3228_0433)	-	412836..413510 (+)	675	WP_082199333.1	prepilin-type cleavage/methylation domain-containing protein	-
CHELV3228_RS02190 (CHELV3228_0434)	-	413507..413956 (+)	450	WP_082199334.1	hypothetical protein	-
CHELV3228_RS02195 (CHELV3228_0435)	rpsR	413967..414227 (-)	261	WP_082199335.1	30S ribosomal protein S18	-
CHELV3228_RS02200 (CHELV3228_0436)	-	414239..414736 (-)	498	WP_082199336.1	single-stranded DNA-binding protein	-
CHELV3228_RS02205 (CHELV3228_0437)	rpsF	414745..415122 (-)	378	WP_082199337.1	30S ribosomal protein S6	-
CHELV3228_RS02210 (CHELV3228_0438)	rseP	415233..416336 (-)	1104	WP_082199338.1	RIP metalloprotease RseP	-
CHELV3228_RS02215 (CHELV3228_0439)	pgsA	416333..416866 (-)	534	WP_082199339.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 244 a.a.
• Molecular weight: 26819.29 Da
• Isoelectric Point: 8.6033

>NTDB_id=223613 CHELV3228_RS02175 WP_082199331.1 411807..412541(+) (proC) [Campylobacter helveticus strain ATCC 51209]
MSSIYILANGVMASALAYGLKDTYEVYIVGRKAQKLETLKNEGFKTLLYDEFELDNKNVILAFKPYALEEMSKILKGEAR
ILISVLANTSLKDLECIRAKNTARIMPNIAAKYKASTTPFILKNELFREEIIQILESFGSAYELASEKQMPSAMALSGCA
PAFLSLVAESLANGGVHRGLDKELSLKLTQGLFKSFSTLLSNEHPAFIKESVCSPAGVSIRGVKVLEERAVRAAFMEAVY
ISSK

Nucleotide

• Length: 735 bp

>NTDB_id=223613 CHELV3228_RS02175 WP_082199331.1 411807..412541(+) (proC) [Campylobacter helveticus strain ATCC 51209]
ATGTCTAGCATTTACATACTTGCAAATGGTGTTATGGCAAGTGCCTTAGCCTATGGCTTAAAAGACACTTATGAGGTTTA
TATCGTAGGACGCAAAGCTCAAAAGCTTGAAACTTTAAAAAATGAGGGCTTTAAAACTTTGCTTTATGATGAATTTGAGC
TGGATAATAAAAATGTTATCTTGGCTTTTAAACCATACGCTTTAGAGGAAATGTCTAAAATCTTAAAAGGTGAAGCTAGA
ATTTTAATCTCCGTTTTGGCAAACACAAGCCTAAAAGATTTGGAATGTATCCGTGCTAAAAATACCGCAAGAATTATGCC
AAATATCGCTGCTAAATACAAAGCCTCCACTACGCCTTTCATATTAAAAAATGAACTTTTTAGAGAGGAAATTATCCAAA
TTTTGGAAAGTTTTGGTAGTGCTTATGAATTGGCTAGTGAAAAACAAATGCCAAGTGCTATGGCATTGAGTGGTTGCGCA
CCAGCCTTTCTTTCTTTAGTGGCGGAAAGCCTTGCAAATGGTGGGGTGCATAGGGGCTTGGACAAAGAATTAAGCCTCAA
GCTTACGCAAGGACTTTTTAAAAGTTTTTCCACACTTCTATCCAACGAACATCCAGCTTTTATAAAAGAGAGTGTTTGCT
CACCTGCTGGGGTAAGCATAAGAGGCGTGAAAGTATTGGAAGAAAGAGCTGTTAGAGCAGCATTTATGGAAGCTGTATAT
ATTAGCTCCAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-87)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (147-239)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	63.75	98.361	0.627