Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BS11774_RS10370 Genome accession   NZ_CP026010
Coordinates   1986130..1987944 (+) Length   604 a.a.
NCBI ID   WP_128473731.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 11774     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1981130..1992944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS10355 (BS11774_10310) glvR 1981947..1982711 (+) 765 WP_128473730.1 MurR/RpiR family transcriptional regulator GlvR -
  BS11774_RS10360 (BS11774_10315) malP 1982726..1984309 (+) 1584 WP_003233606.1 PTS maltose transporter subunit IIBC -
  BS11774_RS10365 (BS11774_10320) yfiB 1984415..1986136 (+) 1722 WP_029726857.1 ABC transporter ATP-binding protein -
  BS11774_RS10370 (BS11774_10325) rcrQ 1986130..1987944 (+) 1815 WP_128473731.1 ABC transporter ATP-binding protein Regulator
  BS11774_RS10375 (BS11774_10330) catD 1988097..1988501 (+) 405 WP_015252533.1 DoxX family oxidoreductase CatD -
  BS11774_RS10380 (BS11774_10335) catE 1988519..1989376 (+) 858 WP_128473732.1 catechol 2,3-dioxygenase -
  BS11774_RS10385 (BS11774_10340) lnrJ 1989494..1990696 (+) 1203 WP_029317465.1 two-component system sensor histidine kinase LnrJ -
  BS11774_RS10390 (BS11774_10345) lnrK 1990693..1991355 (+) 663 WP_101172078.1 two-component system response regulator LnrK -
  BS11774_RS10395 (BS11774_10350) lnrL 1991499..1992434 (+) 936 WP_101172080.1 linearmycin resistance ATP-binding protein LnrL -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67427.21 Da        Isoelectric Point: 9.6971

>NTDB_id=221651 BS11774_RS10370 WP_128473731.1 1986130..1987944(+) (rcrQ) [Bacillus subtilis strain ATCC 11774]
MLKDIRKPFQYPKLPIDKKEGAKKRAKAKDTKGTLRRIWSYLAERKGLLILVMLMVVISAIFGLLGPFVIGKAIDHFIVG
KTVSGLIPVLLLLLAIYIIQSLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSST
LNTSVIQILSSVITFAGTIAVMLYMSPLLTLITLTIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIK
AYSREKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGP
TGAGKTTVTNLLARFYEPDKGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTAN
AHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALDRLMEGRTSVIIAHR
LNTIQRADQIVVLKDGEMIEKGSHDELIRQKGFYSDLYESQFEK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=221651 BS11774_RS10370 WP_128473731.1 1986130..1987944(+) (rcrQ) [Bacillus subtilis strain ATCC 11774]
ATGCTAAAAGACATCCGCAAGCCTTTCCAATATCCCAAACTGCCAATTGACAAAAAAGAAGGCGCGAAAAAGCGGGCGAA
AGCAAAGGATACAAAGGGCACACTGAGACGAATCTGGTCTTACTTGGCTGAAAGAAAAGGACTGCTCATACTTGTCATGC
TAATGGTTGTCATCAGCGCCATATTCGGACTCCTTGGTCCCTTTGTGATCGGAAAGGCCATTGACCATTTTATCGTCGGG
AAAACGGTCAGCGGCTTGATTCCCGTTTTGCTTCTTCTGCTTGCTATCTATATCATTCAGTCCCTGTCGCTTTGGTTTCA
AAACTATTGGATGATTACGATCTCGCAGGGCACGGTTTTCAGAATGAGAAGCGAATTGTTCACCCATCTGCATGAGCTGC
CAATTCCGTTTTTTGATAAACAGCGGCACGGCGAGCTGATGAGCCGGGTGACGAATGACATCGAAAATGTCAGTTCTACC
TTAAATACGTCAGTCATTCAAATTTTGTCAAGCGTGATCACCTTTGCCGGGACCATTGCAGTGATGCTGTACATGAGCCC
GCTCCTTACATTGATTACGCTGACCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGC
TGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAA
GCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCA
GACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACAATGATTGCGGCAATCGGCGGTT
TGTTTGCGCTGAAAGGCTGGATCTCGATCGGCTCCATCGTTGTCTTTGCCGAGTATTCAAGACAATTTACACGCCCTTTA
AACGATCTGGCCAACCAGTTTAATACGATGCTGTCCGCAATCGCCGGCGCTGAACGGGTGTTTGACGTGCTTGATGAAAA
AGAAGAGCGCGAGGATGAAAAGAACGCCGTGCATCAGCCCATCCAAACAGGCAGCATTGAATTCCGGGATGTGTCCTTCG
GTTACGATAAAGGGCAGCAGACACTGAAGCATTTACAGTTTACCGTGCCTGCAGGGCAGTCCATCGCGTTTGTCGGGCCG
ACGGGGGCGGGAAAGACAACCGTCACTAACCTTCTCGCCCGTTTTTACGAGCCTGACAAAGGAAAAATTTTAATCGATGG
TACAGATATTAAAACTCTTACCAGAGCAAGCCTGAGAAAAAACATGGGGTTTGTTCTTCAGGATTCTTTCTTATTTCAGG
GAACGATCAGAGAAAACATTCGCTACGGCAGGCTTGATGCTTCTGATCAGGAAGTCGAAGCCGCTGCAAAAACAGCGAAT
GCCCATAGTTTTATTGAAAGGCTGCCAAAAGGGTATGACACCGTGCTGACGCAAAACGGTTCGGGCATCAGTCAAGGACA
GAAGCAGTTGATTTCTATAGCGAGGGCGGTGCTTGCCGATCCGGTTCTTCTCATTTTGGATGAAGCGACAAGCAACATTG
ATACCGTAACAGAAGTCAACATTCAAGAAGCGCTCGACCGTTTAATGGAAGGAAGAACAAGCGTCATCATTGCCCACAGG
CTGAACACCATTCAAAGAGCGGACCAGATTGTGGTGCTAAAAGACGGTGAAATGATTGAAAAAGGCAGCCATGACGAGCT
GATTCGGCAAAAAGGATTTTACAGTGACTTATATGAAAGCCAATTTGAGAAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(49-320)

ABC transporter (ABC_tran)

(382-531)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.828

96.026

0.382