Detailed information
Bioinformatically predicted
Overview
| Name | rarA | Type | Machinery gene |
| Locus tag | SAS_RS08295 | Genome accession | NC_002953 |
| Coordinates | 1683255..1684529 (+) | Length | 424 a.a. |
| NCBI ID | WP_000102740.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus subsp. aureus MSSA476 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1678255..1689529
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAS_RS08265 (SAS1557) | mnmA | 1678457..1679575 (-) | 1119 | WP_000066094.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| SAS_RS08270 (SAS1558) | - | 1679576..1680718 (-) | 1143 | WP_000409158.1 | cysteine desulfurase family protein | - |
| SAS_RS08275 (SAS1559) | - | 1681030..1682043 (+) | 1014 | WP_000985895.1 | LLM class flavin-dependent oxidoreductase | - |
| SAS_RS08280 (SAS1560) | - | 1682280..1682426 (-) | 147 | WP_000009238.1 | SAS049 family protein | - |
| SAS_RS08285 (SAS1561) | - | 1682466..1682648 (-) | 183 | WP_000752909.1 | CsbD family protein | - |
| SAS_RS08290 (SAS1562) | cymR | 1682748..1683170 (-) | 423 | WP_000704122.1 | cysteine metabolism transcriptional regulator CymR | - |
| SAS_RS08295 (SAS1563) | rarA | 1683255..1684529 (+) | 1275 | WP_000102740.1 | replication-associated recombination protein A | Machinery gene |
| SAS_RS08300 (SAS1564) | - | 1684690..1685463 (-) | 774 | WP_000682646.1 | tRNA threonylcarbamoyladenosine dehydratase | - |
| SAS_RS08305 | - | 1685463..1685591 (-) | 129 | WP_001790559.1 | hypothetical protein | - |
| SAS_RS08310 (SAS1566) | aspS | 1685924..1687690 (-) | 1767 | WP_000044799.1 | aspartate--tRNA ligase | - |
| SAS_RS08315 (SAS1567) | hisS | 1687706..1688968 (-) | 1263 | WP_000590826.1 | histidine--tRNA ligase | - |
Sequence
Protein
Download Length: 424 a.a. Molecular weight: 47264.84 Da Isoelectric Point: 8.3539
>NTDB_id=22161 SAS_RS08295 WP_000102740.1 1683255..1684529(+) (rarA) [Staphylococcus aureus subsp. aureus MSSA476]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP
Nucleotide
Download Length: 1275 bp
>NTDB_id=22161 SAS_RS08295 WP_000102740.1 1683255..1684529(+) (rarA) [Staphylococcus aureus subsp. aureus MSSA476]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGGGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGGGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rarA | Bacillus subtilis subsp. subtilis str. 168 |
69.286 |
99.057 |
0.686 |