Detailed information NTG0219586

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: BC8716_RS20575
• Genome accession: NZ_CP019985
• Coordinates: 4183765..4186122 (-)
• Length: 785 a.a.
• NCBI ID: WP_094428720.1
• Uniprot ID: -
• Organism: Shouchella clausii strain DSM 8716
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4178765..4191122

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BC8716_RS20555 (BC8716_20540)	-	4179281..4180231 (-)	951	WP_094428712.1	IS30 family transposase	-
BC8716_RS20560 (BC8716_20545)	dtd	4180479..4180919 (-)	441	WP_094428714.1	D-aminoacyl-tRNA deacylase	-
BC8716_RS20565 (BC8716_20550)	-	4180940..4183147 (-)	2208	WP_216924180.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	-
BC8716_RS20570 (BC8716_20555)	-	4183260..4183775 (-)	516	WP_094428718.1	adenine phosphoribosyltransferase	-
BC8716_RS20575 (BC8716_20560)	recJ	4183765..4186122 (-)	2358	WP_094428720.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
BC8716_RS20580 (BC8716_20565)	-	4186184..4186486 (-)	303	WP_094428722.1	lipopolysaccharide assembly LapA domain-containing protein	-
BC8716_RS20585 (BC8716_20570)	secF	4186504..4187439 (-)	936	WP_094428724.1	protein translocase subunit SecF	-
BC8716_RS20590 (BC8716_20575)	secD	4187429..4188730 (-)	1302	WP_094428726.1	protein translocase subunit SecD	-
BC8716_RS20595 (BC8716_20580)	-	4188765..4189055 (-)	291	WP_094428728.1	post-transcriptional regulator	-
BC8716_RS20600 (BC8716_20585)	spoVB	4189224..4190774 (+)	1551	WP_094428730.1	stage V sporulation protein B	-
BC8716_RS20605 (BC8716_20590)	-	4190811..4191050 (-)	240	WP_094428732.1	hypothetical protein	-

Sequence

Protein

• Length: 785 a.a.
• Molecular weight: 87719.43 Da
• Isoelectric Point: 5.1109

>NTDB_id=219586 BC8716_RS20575 WP_094428720.1 4183765..4186122(-) (recJ) [Shouchella clausii strain DSM 8716]
MLQAKTRWRILEQNELLAQELADELRVSMLTARLLVRRGIQTVQAAKRFLHYEEPTFYDPFLLKGMEETIERIALAVKRN
ERILVFGDYDADGVSSTSVMLTALQTYGADCDYYIPNRFTEGYGPNCPALDFAKRQGYHLVITVDTGISALNEAAHAKDI
GLDFIITDHHEPPPVLPEALAIINPKQPGCPYPFKELAGVGVAFKVAHALLGRLPEELLDYAVIGTIADLVPLVDENRLL
AKKGLRAIESSGRPGIRALKEVCSIKQEAMDADHIGFAIGPRLNAAGRLDSANPAVELLLADEDEEAKALATEIDSLNKE
RQAIVSKMTEEAIRLVETTYGTKIPHAIVVAKEGWNPGVIGIVASRLVEQFYRPTIVMSIDESSGLAKGSARSIEGFDMY
RELANNRDILPHFGGHPMAAGMTLKTNDIGDLRSRLIEQAKQTLTDDMLTPATDIDLVAEVEDVTVQVIGELQALAPFGV
ANRKPIVLVEDAHISDMRRIGSNQNHLKIQFAGAQKPLDGIAFRMGHLYEEITPHAKLSAIGTVSLNEWNGKVKPQLIID
DLAVLEWQLFDWRSIQPNRLNSRLLDLPREKLVAISFQEGTKERLGLDVPVYDYQQAPSFFEAYVVLLDLPSNRVELETL
FSKKGKPSRVYVVFSEEEESFFQTNPNREQFKWYYGFIKKKQRFSLNQLGAKLEKHKGWSARTVEFMTTVFLELGFIKLD
AGIVEAVENPEKKALTASPTYQAKQEKAWLENEFVFASYQQLKEWFQAAIEGSAETKEESILNGL

Nucleotide

• Length: 2358 bp

>NTDB_id=219586 BC8716_RS20575 WP_094428720.1 4183765..4186122(-) (recJ) [Shouchella clausii strain DSM 8716]
ATGTTGCAAGCAAAAACAAGATGGCGCATTTTAGAACAGAACGAGCTGTTGGCGCAAGAGCTCGCAGACGAGCTGCGTGT
ATCGATGTTAACGGCCCGTCTGCTTGTACGCCGGGGAATCCAAACAGTCCAGGCGGCCAAGCGCTTTTTACACTACGAAG
AGCCGACGTTTTACGATCCCTTCTTGTTGAAAGGGATGGAAGAAACGATTGAACGAATCGCCCTCGCAGTCAAACGGAAC
GAACGCATTCTTGTTTTTGGTGACTATGATGCTGATGGTGTCAGTTCTACTTCCGTGATGCTAACAGCGTTACAAACGTA
TGGCGCCGACTGTGATTACTATATACCAAACCGTTTTACAGAAGGATACGGGCCCAATTGCCCAGCGCTTGACTTTGCAA
AAAGGCAAGGTTATCACTTAGTGATAACAGTCGATACAGGCATTTCTGCTTTGAATGAAGCTGCTCATGCCAAAGACATC
GGCCTGGATTTTATTATCACTGACCACCACGAGCCGCCGCCGGTTTTGCCAGAGGCATTGGCGATCATTAATCCTAAGCA
GCCTGGTTGCCCGTATCCATTTAAAGAGCTTGCCGGTGTAGGCGTTGCCTTTAAAGTTGCACACGCTTTGCTCGGGCGCC
TGCCTGAAGAGTTGCTCGATTATGCTGTGATCGGTACGATCGCCGATTTGGTCCCACTCGTCGATGAAAATCGGCTGTTG
GCCAAAAAGGGGCTTCGCGCAATTGAATCAAGCGGCCGCCCTGGGATCCGTGCCTTAAAGGAAGTATGCAGCATAAAGCA
GGAAGCAATGGACGCCGACCATATCGGCTTTGCGATTGGGCCTCGTCTAAATGCGGCAGGGCGGCTTGATTCTGCTAATC
CAGCCGTTGAGCTGCTCCTAGCTGATGAAGATGAAGAAGCAAAAGCGCTAGCCACAGAAATCGATAGCCTCAATAAAGAA
CGGCAAGCAATTGTTAGCAAAATGACAGAAGAAGCGATTCGCCTTGTTGAAACAACTTATGGCACAAAGATCCCTCATGC
CATCGTTGTAGCGAAGGAAGGCTGGAATCCAGGGGTCATCGGAATTGTTGCTTCTCGCCTTGTAGAACAGTTTTACCGTC
CGACAATTGTCATGAGCATTGACGAATCTTCAGGACTTGCCAAAGGCTCGGCCAGAAGCATTGAAGGGTTTGACATGTAC
CGGGAATTAGCGAATAATCGGGACATACTCCCTCATTTTGGTGGACACCCGATGGCAGCAGGGATGACACTTAAAACAAA
CGACATTGGCGACTTACGTTCTCGTTTAATCGAGCAAGCCAAGCAGACACTTACTGACGACATGCTTACACCTGCCACGG
ATATAGACCTCGTTGCAGAGGTGGAGGATGTCACCGTTCAAGTGATTGGCGAGTTGCAGGCACTTGCTCCGTTTGGCGTT
GCCAACCGTAAACCGATTGTACTTGTTGAGGATGCGCACATTTCCGATATGCGTCGGATTGGCAGCAACCAAAACCATTT
GAAAATCCAGTTTGCTGGCGCCCAAAAGCCGCTTGACGGAATAGCTTTTAGAATGGGGCATCTGTATGAAGAGATCACGC
CACATGCAAAGTTATCAGCAATCGGAACGGTATCGTTGAATGAATGGAACGGAAAAGTAAAACCACAGCTTATTATTGAC
GATCTCGCCGTATTGGAGTGGCAACTATTTGATTGGCGTAGCATCCAGCCAAACCGCTTAAACAGTCGGTTGCTTGACTT
GCCTCGTGAAAAACTCGTCGCTATTTCCTTTCAAGAAGGGACAAAGGAAAGACTTGGGTTGGATGTACCGGTATATGATT
ACCAACAAGCGCCTTCCTTTTTTGAAGCTTATGTCGTATTGCTCGATTTGCCTAGCAACCGGGTTGAATTGGAAACTCTT
TTTTCTAAGAAAGGGAAACCAAGCCGTGTTTATGTTGTGTTCTCGGAGGAGGAAGAATCGTTTTTTCAAACGAATCCAAA
CCGTGAGCAGTTCAAATGGTATTACGGATTTATTAAGAAAAAACAACGCTTTTCACTGAATCAACTCGGCGCTAAGCTTG
AAAAGCACAAAGGCTGGTCAGCCCGCACGGTCGAATTTATGACCACTGTATTTTTAGAACTTGGTTTTATTAAGCTTGAC
GCCGGCATCGTTGAAGCCGTAGAAAACCCTGAAAAAAAAGCGTTGACTGCATCGCCGACTTACCAAGCCAAGCAGGAAAA
AGCATGGCTTGAAAATGAATTTGTTTTTGCTTCTTATCAACAGTTAAAAGAATGGTTCCAGGCTGCCATCGAAGGGAGCG
CTGAAACAAAAGAGGAGTCGATCCTAAATGGATTATAA

Domains

Predicted by InterproScan.

• DHH family (DHH) (82-226)

• DHHA1 domain (DHHA1) (315-438)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-766)

• RecJ OB domain (RecJ_OB) (455-561)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Bacillus subtilis subsp. subtilis str. 168	50	100	0.502