Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CR922_RS05585 Genome accession   NZ_CP025400
Coordinates   1047254..1049002 (-) Length   582 a.a.
NCBI ID   WP_059257332.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain EPS     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1042254..1054002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CR922_RS05560 dltD 1042625..1043893 (-) 1269 WP_011225797.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -
  CR922_RS05565 dltC 1043886..1044125 (-) 240 WP_002950439.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  CR922_RS05570 dltB 1044143..1045390 (-) 1248 WP_002950436.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  CR922_RS05575 dltA 1045387..1046937 (-) 1551 WP_011225796.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  CR922_RS05580 - 1046946..1047077 (-) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  CR922_RS05585 rcrQ 1047254..1049002 (-) 1749 WP_059257332.1 ABC transporter ATP-binding protein Regulator
  CR922_RS05590 - 1048992..1050731 (-) 1740 WP_059257333.1 ABC transporter ATP-binding protein -
  CR922_RS05595 - 1050764..1051375 (-) 612 WP_041827001.1 lysozyme family protein -
  CR922_RS05600 - 1051377..1052354 (-) 978 Protein_1027 nucleoid-associated protein -
  CR922_RS05605 glyA 1052361..1053611 (-) 1251 WP_011227085.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65897.54 Da        Isoelectric Point: 9.2071

>NTDB_id=218583 CR922_RS05585 WP_059257332.1 1047254..1049002(-) (rcrQ) [Streptococcus thermophilus strain EPS]
MKARNNKSTLKRLCKDILSQRYLFALATVGTIVQVALTVYFPILLGDAVDAVLKMNAVFLMSRLIWQMLLLILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAIPFSYLDRQGTGDMVSRVTTDSDQLNNGLLMFFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVTRFIARKSYQLYRNQTKWRGKQTQLIEESLTQEALIQILNAQDQMVRNFNEVNGKYANYSQG
AIFYSSAVNPATRFFNSLLYALITGVGAYRIMSGGTFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEDEIPETGNAVLDEAEVQGHFQFDHVQFGYLQNKPLIKDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGQIL
LDGRDITYYTRESLRKQIGMVLQETWLKVATIHDNIAYGNPKASREEVVAAAKAANADFFIKQLPLGYDTFLRDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
NQLMRTKGMYYRMQTAQKTQNN

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=218583 CR922_RS05585 WP_059257332.1 1047254..1049002(-) (rcrQ) [Streptococcus thermophilus strain EPS]
ATGAAGGCTAGAAATAACAAGTCAACGCTTAAACGATTATGTAAAGATATCCTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTGTTCAAGTTGCTTTGACTGTCTACTTCCCTATTTTGCTTGGCGATGCAGTAGATGCTGTTCTTA
AGATGAATGCTGTCTTTTTGATGTCACGTTTGATTTGGCAGATGCTTTTGCTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGATTGATTTATTCTTATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATTCATGC
TATTCCATTCAGTTATCTTGATCGTCAAGGAACTGGAGACATGGTTAGCCGTGTGACTACAGATAGTGACCAATTGAATA
ATGGTCTCCTTATGTTCTTTAATCAATTTTTCGTTGGACTTTTGACCATCTTTGTCATAATCATTACCATGGCTCGCTTA
GACTGGTTCATGATGCTCTTAGTTCTAGTGATGACACCTTTATCAATGCTTGTGACTCGTTTCATTGCTAGGAAGAGTTA
TCAACTCTATCGCAATCAAACCAAGTGGAGAGGCAAACAGACTCAGCTGATCGAAGAAAGTCTAACTCAGGAAGCTCTGA
TACAAATTCTAAATGCTCAAGACCAGATGGTTCGCAATTTTAATGAGGTTAATGGTAAGTATGCTAACTATTCACAGGGA
GCCATCTTTTACTCGTCAGCGGTTAACCCAGCTACACGTTTTTTTAATAGCTTGCTTTACGCTCTCATTACAGGTGTTGG
TGCCTATCGCATCATGTCGGGAGGCACATTTACAGTGGGACAATTGACTACCTTCCTAAACTATGTCACTCAGTATACCA
AACCTTTTAATGACATTTCATCTGTCCTATCTGAACTTCAAAGTGCTTTAGCCTGTGCTGATCGTCTATATATGATTTTA
GATGAAGATGAAATACCAGAAACGGGAAATGCGGTTTTGGACGAAGCAGAAGTTCAGGGACATTTTCAATTTGATCATGT
TCAATTTGGCTATTTGCAAAATAAACCTCTTATCAAGGATTTGAGTATTGATATTCCTGCTGCGAGTACCGTTGCTATTG
TTGGCCCAACAGGAGCAGGAAAATCTACTTTGATTAATCTTCTCATGCGTTTTTATGATTTGGATAAGGGTCAAATTTTG
CTAGACGGTCGAGATATTACGTATTATACCCGTGAGAGTCTTCGCAAGCAGATTGGGATGGTTCTACAAGAAACTTGGCT
TAAAGTAGCTACTATCCATGATAATATTGCCTATGGCAATCCAAAAGCTAGTCGAGAGGAAGTAGTTGCAGCAGCCAAAG
CAGCTAATGCTGATTTCTTTATTAAACAATTACCTCTAGGCTATGACACTTTCTTGAGAGATGCAGGGCAATCTCTTTCA
CAAGGTCAACGTCAGTTACTAACTATTGCTCGTATATTTGTCAATGTTCCTAAAATTCTTATTTTGGATGAAGCAACATC
AAGTATTGATACCCGTACGGAGCTCCTTATTCAAGAAGCTTTTGCTAAACTGATGAAAGGTCGGACGAGTTTCATTATTG
CTCATAGATTATCTACCATTGAGAATGCAGACCTTATTTTGGTAATGAATAATGGTGATATCGTTGAACATGGAACACAT
AATCAATTAATGAGGACTAAGGGAATGTACTATCGTATGCAGACAGCCCAAAAAACACAAAATAATTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.285

100

0.373