Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CWI64_RS02255 Genome accession   NZ_CP025076
Coordinates   434759..436507 (-) Length   582 a.a.
NCBI ID   WP_000828830.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain BHN97x     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 429759..441507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI64_RS11910 - 430161..430394 (-) 234 Protein_421 transcriptional regulator -
  CWI64_RS02210 (CWI64_02210) - 430407..430787 (-) 381 WP_000566550.1 arsenate reductase family protein -
  CWI64_RS02215 (CWI64_02215) - 430780..431103 (-) 324 WP_001812122.1 hypothetical protein -
  CWI64_RS02220 (CWI64_02220) - 431117..431365 (-) 249 Protein_424 replication initiator protein A -
  CWI64_RS02225 (CWI64_02225) - 431362..431535 (-) 174 WP_001168349.1 hypothetical protein -
  CWI64_RS02230 (CWI64_02230) rplL 431734..432102 (-) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  CWI64_RS02235 (CWI64_02235) rplJ 432178..432678 (-) 501 WP_001287278.1 50S ribosomal protein L10 -
  CWI64_RS02245 (CWI64_02245) - 432928..434187 (-) 1260 WP_000862486.1 TRZ/ATZ family protein -
  CWI64_RS02255 (CWI64_02255) rcrQ 434759..436507 (-) 1749 WP_000828830.1 ABC transporter ATP-binding protein Regulator
  CWI64_RS02260 (CWI64_02260) - 436509..438233 (-) 1725 WP_000681675.1 ABC transporter ATP-binding protein -
  CWI64_RS02265 (CWI64_02265) msrB 438291..439229 (-) 939 WP_057485937.1 peptide-methionine (R)-S-oxide reductase MsrB -
  CWI64_RS11915 (CWI64_02270) - 439296..439448 (-) 153 WP_001812125.1 hypothetical protein -
  CWI64_RS02275 (CWI64_02275) thrB 439524..440393 (-) 870 WP_054388715.1 homoserine kinase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64904.48 Da        Isoelectric Point: 7.3120

>NTDB_id=217268 CWI64_RS02255 WP_000828830.1 434759..436507(-) (rcrQ) [Streptococcus pneumoniae strain BHN97x]
MKRQTVNQTLKRLAVDLANHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTMDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKRSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKIAIVGPTGAGKSTLINLLMRFYPISSGDIL
LDGQSIYDYTRVSLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGNH
QELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=217268 CWI64_RS02255 WP_000828830.1 434759..436507(-) (rcrQ) [Streptococcus pneumoniae strain BHN97x]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGCCGTAGATTTAGCAAACCATCCCTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCCCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAGATTTACGGGAGCGAATCATCCATAAGCTCCATCG
TTTACCGATTGCCTTTGTAGATAGGCAAGGTAGTGGAGAGATGGTTAGTCGTGTAACCATGGACATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTTAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAGATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACTCAGTTGATTGAAGAATCGCTTAGCCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAACCTTGACCGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAATGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGAGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACATGT
CTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGACTTGTCTATCGATATTCCAGCTGGTAGTAAGATAGCCATCG
TTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATCTTG
CTGGATGGGCAATCCATTTATGATTATACACGAGTATCATTGAGACAGCAGTTTGGTATGGTGCTTCAAGAAACCTGGCT
CACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCAAAG
CAGCTAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTCTCT
GTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAACTTC
TTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGCAAAACTCATGAAGGGCCGCACAAGCTTCATCATTG
CTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAACCAT
CAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.61

97.766

0.368