Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   CWI26_RS01270 Genome accession   NZ_CP025043
Coordinates   240127..242460 (+) Length   777 a.a.
NCBI ID   WP_024378072.1    Uniprot ID   -
Organism   Streptococcus suis strain AH681     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 235127..247460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI26_RS01240 (CWI26_01240) treP 235667..237661 (-) 1995 WP_100881079.1 PTS system trehalose-specific EIIBC component -
  CWI26_RS01245 (CWI26_01245) treR 237894..238607 (+) 714 WP_024378075.1 trehalose operon repressor Regulator
  CWI26_RS01250 (CWI26_01250) - 238665..238976 (+) 312 WP_002935948.1 hypothetical protein -
  CWI26_RS01255 (CWI26_01255) - 238973..239521 (+) 549 WP_044672844.1 CvpA family protein -
  CWI26_RS01270 (CWI26_01270) mutS/mutS2 240127..242460 (+) 2334 WP_024378072.1 endonuclease MutS2 Machinery gene
  CWI26_RS12135 - 242493..242891 (-) 399 WP_024378071.1 hypothetical protein -
  CWI26_RS01280 (CWI26_01280) - 243115..243342 (+) 228 WP_024378070.1 hypothetical protein -
  CWI26_RS01285 (CWI26_01285) - 243323..243628 (+) 306 WP_044672279.1 hypothetical protein -
  CWI26_RS01290 (CWI26_01290) - 243919..244260 (+) 342 WP_024378069.1 LytTR family DNA-binding domain-containing protein -
  CWI26_RS01295 (CWI26_01295) comE/blpR 244260..245000 (+) 741 WP_024376264.1 response regulator transcription factor Regulator
  CWI26_RS01300 (CWI26_01300) - 245010..246341 (+) 1332 WP_100881080.1 GHKL domain-containing protein -
  CWI26_RS01305 (CWI26_01305) - 246538..246687 (-) 150 WP_100881081.1 ComC/BlpC family leader-containing pheromone/bacteriocin -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87424.18 Da        Isoelectric Point: 6.7999

>NTDB_id=216585 CWI26_RS01270 WP_024378072.1 240127..242460(+) (mutS/mutS2) [Streptococcus suis strain AH681]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEDISHLRAEER
HEISRILQELSDMLRPHSSIIRNNAWVIGHLDFIRAKHLFARDYKAVVPTISEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEGILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQRAAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=216585 CWI26_RS01270 WP_024378072.1 240127..242460(+) (mutS/mutS2) [Streptococcus suis strain AH681]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCATCGTATCCAACAGGCCTTCGACGAGTTGACAGATATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGACATCGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAATTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGTCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAGGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCAGAAAAGCTAGCCCGTATTCGAAGAAAAATCCGTGAA
GCTGAAGACCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAAGGCGACATGCTGTCCGATAGCATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAGATTGCTGGGGTTGTCCATGACATTTCAGCTT
CGGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAATGAAGATATCAGTCATTTGCGTGCAGAAGAGCGG
CATGAAATCAGTCGGATTTTGCAAGAGTTGTCCGACATGCTGCGACCTCATAGCAGTATTATCCGCAACAATGCCTGGGT
CATTGGGCATTTGGATTTCATCCGCGCCAAACACCTTTTTGCAAGAGATTACAAGGCTGTAGTTCCGACTATTTCGGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGGCATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACGGGTCCCAACACGGGTGGTAAGACTATCATGCTCAAGACCTTGGGATTGACCCATCTGAT
GGCTCAGTCTGGTTTGCCTATCTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGTG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGCAGATTTTAGCGGAGGCGGAT
CAAGATTCTCTTATTCTCTTTGACGAGTTGGGAGCTGGGACAGATCCGCAGGAGGGTGCGTCGCTGGCAATGGCTATTTT
GGATGACCTTCGTCTGCGGGGGATCAAGACCATGGCGACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGTCTACGACCAACTTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTAGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGAGAAAATGAG
CTCAACAAGGCACGCTTGGAAGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGGCATTCTCAAAAATCTTCA
TGCTGCAGCCAGTCTCAAGCCTCACCAGATCATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATC
TGTCTAAAAACAAGGTTCTGAAGAAAGCCAAAATCCAGCGAGCTGCCAAGGTGGGCGATGACATTATCGTTACAGCTTAT
GGACAACGTGGGACCTTGACCAATCAGCTTAAAGATGGGCGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGGC
CAAAGATGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTTAAACGTGCCA
ATGTACGCGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTCATC
GATCAGGCCCTTCTCAACAATCTGGCACAAGTAGACATTGTCCACGGTATTGGTACAGGGGTTATCCGAGAAGGGGTGAC
CAAGTACCTACGCCGCAACAAGCAGGTCAAGGAGTTCGGCTATGCCCCACAAAATGCAGGTGGATCAGGCTGTACCATTG
TGACCTTTAAGTAA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.152

100

0.409

Multiple sequence alignment