Detailed information NTG0216583

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: CWI26_RS01185
• Genome accession: NZ_CP025043
• Coordinates: 222723..225215 (-)
• Length: 830 a.a.
• NCBI ID: WP_100881073.1
• Uniprot ID: -
• Organism: Streptococcus suis strain AH681
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 217723..230215

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWI26_RS01155 (CWI26_01155)	-	218046..218672 (+)	627	WP_100881070.1	NAD(P)-dependent oxidoreductase	-
CWI26_RS01160 (CWI26_01160)	-	218774..219694 (+)	921	WP_100881071.1	1-phosphofructokinase family hexose kinase	-
CWI26_RS01165 (CWI26_01165)	-	219701..219922 (-)	222	Protein_184	transposase	-
CWI26_RS12305 (CWI26_01170)	-	219915..220208 (+)	294	WP_024419590.1	LPXTG cell wall anchor domain-containing protein	-
CWI26_RS01175 (CWI26_01175)	-	220480..221508 (+)	1029	WP_029177102.1	LPXTG cell wall anchor domain-containing protein	-
CWI26_RS01180 (CWI26_01180)	-	221922..222617 (-)	696	WP_099870932.1	hypothetical protein	-
CWI26_RS01185 (CWI26_01185)	recD/recD2/recDB	222723..225215 (-)	2493	WP_100881073.1	ATP-dependent RecD-like DNA helicase	Machinery gene
CWI26_RS01195 (CWI26_01195)	lepB	225742..226371 (-)	630	WP_100881074.1	signal peptidase I	-
CWI26_RS01200 (CWI26_01200)	rnhC	226381..227271 (-)	891	WP_044767609.1	ribonuclease HIII	-
CWI26_RS01205 (CWI26_01205)	-	227472..228725 (-)	1254	WP_024382967.1	IS110 family transposase	-
CWI26_RS01210 (CWI26_01210)	-	229093..230076 (+)	984	WP_100881075.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 830 a.a.
• Molecular weight: 93332.56 Da
• Isoelectric Point: 4.5987

>NTDB_id=216583 CWI26_RS01185 WP_100881073.1 222723..225215(-) (recD/recD2/recDB) [Streptococcus suis strain AH681]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQITRYERS
KPTSAGLVKYFSSDHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAHELTGLIADDKVQQESTKIFDNSLYFAEHGIHKNLTRLMGKNGFKPFPRTDVEAA
IAELESMSSLTYDDIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKVDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQ
ILAPMYRGAAGIDQLNTMTQALLNPLEEGELEFLHNEHAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQGEMAEQDSKDALSEKAESKTATTTQTQPPTQPDRKELVKVVNENNQQLSLLDQDQPEKTSPQPT
EYILTVDNLLTIDPMIGIEQADIEEFFRKR

Nucleotide

• Length: 2493 bp

>NTDB_id=216583 CWI26_RS01185 WP_100881073.1 222723..225215(-) (recD/recD2/recDB) [Streptococcus suis strain AH681]
ATGAACGAAGTGTATTTTACCGGTACTATTGACCGGATTATTTTTGAAAATCCTAGTAATTTTTATAAAATCCTTCTCCT
TGAAATCGAGGAGACAGACGCAGACTATGATGACTACGAAATTATTGTGACCGGAACGATTGCCGATGTCATTGAAGGAG
AAGACTATCGTTTCTATGGCAATCTGGTCACCCATCCCAAGTATGGTCAGCAACTACAAATCACGCGCTACGAACGCAGC
AAGCCTACCTCAGCTGGTCTGGTTAAGTATTTCTCCAGCGACCATTTCAAGGGAATCGGTCGCAAAACGGCTGAAAAAAT
CGTTGAACTCTATGGCGAAGATACCATTGATAAGATTTTAGCTGAACCTGAAAAACTAACCCAAATCACAGGCCTATCCA
GCAAGAACATGCAGGCATTTGTCGAAAAACTCCGCCTCAATTATGGAACCGAGCTGATCTTGGCAAAACTAGCTGAGTAT
GGTATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAATATAAAGAAAAAACACTTCAGATTATTGAAGAAAATCCCTA
TCAACTGGTCGAAGATGTCCAGGGGCTCGGCTTTACCATTGCCGATAGGATTGCGGAAAACCTAGGAATTGCCAGTGATT
CACCCCAACGTTTTCGTGCCGGCATGCTCTTTAGCCTCATCCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCTACCCTTGAACTGCTGGAAAAATCCCGCCATACCGAGCTGGACCCCGCTGCTGTTGCCCACGA
GTTGACAGGACTGATTGCAGACGACAAGGTACAGCAAGAAAGCACCAAGATTTTCGACAACAGCCTCTACTTTGCCGAAC
ATGGTATCCATAAAAACCTGACCCGCCTGATGGGAAAAAATGGTTTCAAACCCTTCCCACGCACAGACGTTGAGGCTGCC
ATAGCAGAGCTGGAAAGCATGTCTTCTCTCACCTACGATGACATTCAAAAAGAAGCCATTGTCCAAGCCATTACCAATCC
GCTTTTCATTCTGACAGGCGGACCAGGGACTGGAAAAACAACGGTTATCAACGGTATTATCGCGGTCTATGCCATCTTGC
ATAAGGTTGACCTGACTCGCAACCGAGAAGAATGCCCAGTCCTTCTTGCCGCTCCAACTGGACGAGCAGCCAGACGAATG
AATGAGTTGACAGGTCTACCTTCCGCCACCATCCACCGCCACCTCGGTCTGGTAGAAGGACAAGAAGAATCCTACCGTGA
TGATTATTTGGATGCCGACTTCATCATCGTCGACGAGTTTTCTATGGTAGATACTTGGTTGGCAAACCAACTCTTCCAGA
ACATCTCATCCCAGACCCAAGTTTTGATTGTTGGCGATGCGGAGCAATTACCTTCCGTCAGTCCCGGTCAGGTCCTTGCT
GACCTCTTGAAAATTGACAAGCTCCCCAGCATCACTCTGGAACGCATCTATCGTCAATCCGATGATTCGACCATTGTTAC
CCTAGCCAGCCAGATTCGCCAAGGGGCTCTGCCGAGCGATTTCCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCGC
AAAACGAACAAATTCCAGCCCTGATTGAGCGCATTGTCGGCGCAGCCATCAAGTCGGGCATTCCTGCAAACGAAGTACAA
ATCCTCGCTCCCATGTACCGTGGTGCTGCAGGTATTGACCAACTCAACACCATGACCCAGGCCCTGCTCAATCCACTGGA
AGAGGGAGAGTTAGAATTCCTCCATAACGAGCACGCCTTCCGCCAAGGCGACCGGGTCATTCATCTAGTCAACGACGCCG
AAGCCAATGTCTTCAATGGCGACTTGGGCTATATTACTGACCTCCTGCCTGCCAAGTACACCGACTCCAAGCAGGACGAG
ATTACCATCAACTTCGACGGTAGCGAGGTCACCTATCCACGCAATGAATGGTACAAGATTACCCTGGCCTATGCCATGTC
CATCCACAAGTCCCAAGGCAGCGAGTTTCAGGTCGTCATCCTTCCCATCACGCGCACCAGCCACCGCATGCTCCAGCGCA
ATCTGGTCTACACCGCCATCACCCGCTCCAAGAGCAAGCTCATCCTCCTGGGCGAAATCTCCGCCTTCGACTACGCCGTC
AAAAACGCCGGCACCGTCCGAAAAACCTATCTGGTCCCACGTTTCCAAGGGGAAATGGCAGAGCAGGATAGCAAGGATGC
TTTATCTGAAAAAGCCGAAAGCAAAACAGCTACAACCACACAAACCCAGCCCCCTACACAGCCAGACAGAAAAGAACTGG
TTAAAGTAGTCAATGAAAACAACCAACAACTCTCCCTTCTTGATCAAGACCAGCCAGAAAAAACAAGTCCCCAACCCACA
GAATACATTTTGACTGTAGACAACCTGCTAACTATCGACCCCATGATTGGCATAGAACAGGCAGATATTGAAGAATTTTT
CAGGAAAAGATAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

• AAA domain (AAA_30) (332-529)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.799	91.084	0.381