Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BWR56_RS01315 Genome accession   NZ_CP019562
Coordinates   258181..259941 (+) Length   586 a.a.
NCBI ID   WP_049505409.1    Uniprot ID   -
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 253181..264941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS01295 (BWR56_0252) - 254313..255029 (+) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -
  BWR56_RS01300 (BWR56_0253) - 255079..255783 (-) 705 WP_076984298.1 CD20-like domain-containing protein -
  BWR56_RS01305 (BWR56_0254) - 255977..256438 (+) 462 WP_000360526.1 MarR family winged helix-turn-helix transcriptional regulator -
  BWR56_RS01310 (BWR56_0255) rcrP 256422..258191 (+) 1770 WP_076984299.1 ABC transporter ATP-binding protein Regulator
  BWR56_RS01315 (BWR56_0256) rcrQ 258181..259941 (+) 1761 WP_049505409.1 ABC transporter ATP-binding protein Regulator
  BWR56_RS01320 (BWR56_0257) - 260038..260541 (+) 504 WP_049505408.1 phosphatase PAP2 family protein -
  BWR56_RS01325 (BWR56_0258) - 260655..261101 (+) 447 WP_049505407.1 LytTR family DNA-binding domain-containing protein -
  BWR56_RS01330 (BWR56_0259) - 261107..261781 (+) 675 WP_049505406.1 LiaF transmembrane domain-containing protein -
  BWR56_RS01335 (BWR56_0260) rpmB 261886..262074 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  BWR56_RS01340 (BWR56_0261) - 262333..262698 (+) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -
  BWR56_RS01345 (BWR56_0262) - 262701..264368 (+) 1668 WP_049478837.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64612.39 Da        Isoelectric Point: 5.2139

>NTDB_id=216303 BWR56_RS01315 WP_049505409.1 258181..259941(+) (rcrQ) [Streptococcus oralis strain S.MIT/ORALIS-351]
MENKKVSVWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLATEIDLVAVSNIASFLVILYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDIAAQSLNQSLGTVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKDRKLSNMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDMKRSEVHDAFSIVLQDTWLFEGTIRENLIYNQTDISDERMMEASKAVGIHHFIMTLPDGYDTVLDDTLTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=216303 BWR56_RS01315 WP_049505409.1 258181..259941(+) (rcrQ) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGGAAAATAAAAAAGTTTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTCTCCTAATAGCAGT
TGTGGCTGCAGTCATTTCAAGTATCATTACCGTTTATGGTCCAACTAAGATTAAAGAAATTACTAACTTGATTTCAGATG
GTTTGGCTACAGAAATCGACCTGGTAGCTGTGTCAAACATTGCTAGCTTTTTAGTGATTCTCTATGTATTTGGCGCCATT
CTTAACTATACACAGGCCTATATCTTTTCAACGAGTATCCAACATTTTTCAAAACGCTTGCGGACGGCTATCGCTGAAAA
GATTAATCGTTTGCCACTTGGCTATTTTGACCGTCATTCACAAGGAGATACCCTTTCGCGCGTGACCAATGATGTGGATA
TAGCAGCGCAATCTCTCAACCAAAGTCTAGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTGGCATTGGTAACAGTTGTATCAACCCTTGTTGGTTTTGCGGCGGTTTCCGTAATCATGGC
CAAGTCACAGGGGTATTTCAAAGCCCAACAAAATAATCTAGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGCC
ATAATGTAGTGACCAGCTACAACGCAGTGGACACCTCCAAAGCGAGATTTGCAGGTTTAAACCAAGACTTGCATGACAGT
ATCTGGAAATCTCAATTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGAAACTTTAGTTATGTCTTAGTCAT
CATCGTTGGGGCCGCGCTGGCGTTAGAAGGACATATTACGATAGGGATTATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCTCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCTTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAG
TTTCTAGCTGAAGCAGAGATGCAGGATGAATCTCATAAGGACAGAAAATTGAGCAACATGAAAGGGGAAGTAGTCTTTGA
TCATGTGTCCTTTGGATATACACCAGAGCGCACCATTATCCATGACTTTTCTGCGACAGCTCATGCAGGTCAGAAGGTTG
CTATCGTTGGACCGACTGGGGCTGGGAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATAGATAAGGGAAGT
ATCCGTATCGATGGTGTCGATACCAAGGACATGAAACGCTCAGAAGTACACGATGCCTTTTCAATAGTCTTGCAGGACAC
TTGGCTCTTTGAAGGAACGATTCGAGAGAACCTGATCTATAATCAGACAGACATCAGTGATGAACGAATGATGGAAGCCA
GCAAGGCTGTGGGAATCCACCACTTTATCATGACCTTGCCAGATGGCTACGATACTGTTTTGGACGACACCTTGACCTTG
TCTGTCGGACAAAAACAGCTCTTGACCATTGCTCGTGCTTTGCTAAAAGATGCGCCACTCCTAATTCTGGATGAAGCGAC
ATCCTCAGTCGACACACGTACAGAGGAGTTGATTCAGAAAGCCATGGACCGTTTGATGGAGGGACGCACATCCTTTGTCA
TCGCCCACCGCTTGTCAACTATTCGTAATGCCGATTTGATTCTTGTCATGAAAGATGGCAATATCATTGAACAAGGAAAC
CATGAGGAACTGATGGCACAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(23-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.438

99.659

0.662

Multiple sequence alignment