Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CVO91_RS05600 Genome accession   NZ_CP024974
Coordinates   1095482..1097224 (+) Length   580 a.a.
NCBI ID   WP_002940725.1    Uniprot ID   -
Organism   Streptococcus suis strain CZ130302     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1090482..1102224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS05580 (CVO91_05580) - 1091051..1091869 (+) 819 WP_002935241.1 NAD kinase -
  CVO91_RS05585 (CVO91_05585) - 1091869..1092762 (+) 894 WP_002940727.1 RluA family pseudouridine synthase -
  CVO91_RS05590 (CVO91_05590) pta 1092780..1093754 (+) 975 WP_002935239.1 phosphate acetyltransferase -
  CVO91_RS05595 (CVO91_05595) - 1093756..1095495 (+) 1740 WP_002940726.1 ABC transporter ATP-binding protein -
  CVO91_RS05600 (CVO91_05600) rcrQ 1095482..1097224 (+) 1743 WP_002940725.1 ABC transporter ATP-binding protein Regulator
  CVO91_RS05605 (CVO91_05605) - 1097208..1097600 (+) 393 WP_029681487.1 PaaI family thioesterase -
  CVO91_RS05610 (CVO91_05610) mutY 1097834..1098994 (+) 1161 WP_002940717.1 A/G-specific adenine glycosylase -
  CVO91_RS05615 (CVO91_05615) - 1099529..1100987 (-) 1459 Protein_1037 IS1182 family transposase -
  CVO91_RS05620 (CVO91_05620) - 1101224..1102024 (-) 801 WP_100664805.1 XRE family transcriptional regulator -

Sequence

Protein


Download         Length: 580 a.a.        Molecular weight: 64504.65 Da        Isoelectric Point: 5.3570

>NTDB_id=215818 CVO91_RS05600 WP_002940725.1 1095482..1097224(+) (rcrQ) [Streptococcus suis strain CZ130302]
MRQSSFKELVRLVLRQPLRMSLMLVGSLAQVLLTVYLPILIGQAVDAVLIADGQVLLGILGKMVMVILLNTLVQWYLPLV
TNRLVYGMVADLREQVYVKLHQMPLAYLDRQSVGDLVARFSSDSEQLTNGLLMIFNQFFIGILTIFLTIFTMARLDMTMM
LVVVALTPVSLLVARYIAKKSYGYYRKQTQARGQQSQLLEESISQLTLVQSFNAQEQFTKHFQVVNDQYANYSRQAIFAS
STVNPSTRFINAIIYALLAGLGALRIMAGNFTVGSLTTFLNYASQYSKPFNDISSVLSELQSALACADRLFAILALDSID
DQAERKIDSEELKGAISFDNVSFSYSPDRSLIEHLDIAVEAGQKVAIVGPTGAGKSTMINLLMRFYDVTAGQIVLDGVPI
SQYSREDLRRQIGMVLQETWIKSGTIHDNIAYGYPNATRELVIEAAKAANADFFIRQLPQGYDTVLADGGEGLSQGQRQL
LSIARVFVKIPKILILDEATSSIDTRTEILVQEAFAKLMEGRTSFIIAHRLSTIQSADLILVMVDGKIVEQGNHEALMAE
QGVYYQMQTSQQTEEDESVR

Nucleotide


Download         Length: 1743 bp        

>NTDB_id=215818 CVO91_RS05600 WP_002940725.1 1095482..1097224(+) (rcrQ) [Streptococcus suis strain CZ130302]
ATGAGACAATCTAGTTTTAAGGAACTGGTCAGATTGGTTTTACGCCAACCTCTTCGAATGTCCTTGATGTTGGTGGGAAG
TTTAGCGCAAGTGCTTCTGACAGTTTATCTACCGATCTTGATAGGTCAGGCAGTCGATGCAGTATTGATAGCAGATGGTC
AGGTCTTGCTTGGTATTCTAGGCAAAATGGTCATGGTTATCTTGCTTAATACGCTGGTGCAATGGTATCTCCCGCTCGTA
ACCAATCGCTTGGTTTATGGTATGGTGGCTGATTTGCGGGAACAGGTTTATGTGAAGCTGCACCAGATGCCCCTAGCTTA
TCTTGATCGGCAATCAGTCGGCGATTTAGTAGCTCGTTTTTCAAGTGATAGCGAGCAATTAACAAATGGACTCTTGATGA
TTTTTAATCAATTTTTCATTGGTATCTTGACTATTTTCCTAACCATTTTTACGATGGCTAGACTGGACATGACAATGATG
TTGGTTGTTGTTGCCCTGACTCCCGTGTCTCTGCTTGTGGCACGCTATATTGCTAAGAAATCCTATGGTTATTATAGAAA
GCAAACTCAGGCGCGTGGCCAACAATCCCAGTTGCTTGAGGAATCAATTAGTCAATTGACACTAGTTCAGTCTTTCAATG
CTCAGGAGCAATTTACGAAGCATTTTCAGGTTGTCAATGACCAGTATGCGAATTACTCCCGACAGGCTATCTTTGCCTCT
TCGACAGTCAATCCAAGTACGCGGTTTATCAATGCTATTATTTATGCCTTACTTGCAGGACTTGGAGCGCTGAGAATTAT
GGCAGGAAATTTTACAGTGGGATCCCTGACAACCTTCCTCAATTATGCTAGTCAGTACAGCAAGCCTTTTAATGATATTT
CCTCGGTCCTATCGGAATTGCAGAGCGCCTTAGCTTGTGCAGACAGGCTGTTTGCTATCTTGGCTCTAGATAGCATTGAC
GATCAGGCTGAGCGGAAAATTGATTCAGAGGAGTTGAAGGGAGCTATTTCCTTTGACAATGTGTCTTTCTCCTATAGCCC
TGACCGTTCTCTGATAGAACATCTGGATATTGCTGTCGAAGCTGGACAAAAAGTAGCCATTGTTGGACCTACTGGTGCTG
GTAAATCAACCATGATTAACCTTCTTATGCGTTTCTATGATGTGACTGCTGGTCAGATTGTTCTAGACGGGGTTCCGATT
AGCCAGTACAGTCGTGAGGATCTCCGCAGACAGATTGGTATGGTTTTACAGGAGACATGGATCAAATCTGGTACCATTCA
TGATAATATTGCCTATGGCTATCCAAATGCCACGCGGGAATTGGTCATTGAGGCAGCTAAGGCAGCCAATGCAGACTTCT
TTATTCGTCAGCTTCCGCAGGGTTACGATACGGTTTTGGCAGATGGAGGAGAAGGCTTATCCCAGGGACAACGTCAGCTT
TTGTCTATTGCGCGTGTCTTTGTCAAGATACCTAAAATCCTGATTTTAGATGAGGCGACTTCCTCTATTGATACACGGAC
AGAAATTTTAGTACAGGAAGCATTTGCCAAATTGATGGAAGGACGGACCAGTTTTATTATTGCTCATCGCCTATCAACCA
TTCAATCAGCTGACTTGATTTTGGTCATGGTGGATGGAAAAATTGTTGAACAAGGGAATCATGAAGCGTTGATGGCTGAA
CAAGGCGTTTATTATCAAATGCAAACAAGTCAGCAGACAGAGGAGGATGAAAGTGTTAGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(354-501)

ABC transporter transmembrane region (ABC_membrane)

(22-289)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

40.374

92.241

0.372