Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   BWQ98_RS11575 Genome accession   NZ_CP019299
Coordinates   1707500..1708531 (-) Length   343 a.a.
NCBI ID   WP_050212887.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain HKU1-14     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1702500..1713531
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWQ98_RS09150 (BWQ98_09160) - 1702638..1703399 (-) 762 WP_001107757.1 SDR family oxidoreductase -
  BWQ98_RS09155 (BWQ98_09165) ytpR 1703441..1704067 (-) 627 WP_000578289.1 YtpR family tRNA-binding protein -
  BWQ98_RS09160 (BWQ98_09170) - 1704083..1704400 (-) 318 WP_000615772.1 thioredoxin family protein -
  BWQ98_RS09165 (BWQ98_09175) - 1704397..1704696 (-) 300 WP_001013974.1 DUF4651 domain-containing protein -
  BWQ98_RS11570 - 1704894..1704974 (-) 81 WP_223200442.1 hypothetical protein -
  BWQ98_RS09175 (BWQ98_09185) - 1704981..1705172 (-) 192 WP_000291826.1 cell wall-binding protein -
  BWQ98_RS09180 (BWQ98_09190) - 1705333..1706007 (-) 675 WP_000725719.1 hypothetical protein -
  BWQ98_RS09185 (BWQ98_09195) - 1706012..1706458 (-) 447 WP_000776596.1 LytTR family DNA-binding domain-containing protein -
  BWQ98_RS09190 (BWQ98_09200) - 1706572..1707075 (-) 504 WP_001861715.1 phosphatase PAP2 family protein -
  BWQ98_RS09195 (BWQ98_09205) - 1707072..1707434 (-) 363 WP_000078805.1 DUF2200 domain-containing protein -
  BWQ98_RS11575 rcrQ 1707500..1708531 (-) 1032 WP_050212887.1 ATP-binding cassette domain-containing protein Regulator
  BWQ98_RS11580 - 1708538..1709359 (-) 822 Protein_1725 ABC transporter permease -
  BWQ98_RS09205 (BWQ98_09215) - 1709376..1709847 (-) 472 Protein_1726 MarR family winged helix-turn-helix transcriptional regulator -
  BWQ98_RS09215 (BWQ98_09225) - 1709971..1710687 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  BWQ98_RS09225 (BWQ98_09235) ply 1711570..1712985 (-) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  BWQ98_RS09230 (BWQ98_09240) - 1712996..1713406 (-) 411 WP_000595757.1 hypothetical protein -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 38122.44 Da        Isoelectric Point: 4.5262

>NTDB_id=214740 BWQ98_RS11575 WP_050212887.1 1707500..1708531(-) (rcrQ) [Streptococcus pneumoniae strain HKU1-14]
MGFLLMGALFIVLPRTMVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTV
AFIGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTTIVNLLMKFYEIDKRSIRI
DGVDTKAMTRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVG
QKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTFFVIAHRLSTIRNADLILVMKDGNIIEQGNYEE
LMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=214740 BWQ98_RS11575 WP_050212887.1 1707500..1708531(-) (rcrQ) [Streptococcus pneumoniae strain HKU1-14]
ATGGGCTTCCTTCTCATGGGAGCACTCTTCATCGTTCTTCCCCGAACTATGGTCTCTGCTAAGCGGATTAATCAAGTTTT
AGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTGCAGCTGACTGATGAAAACTTCAAAGGTCAGGTCGAGTTTAAGG
ATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATGTTAGCTTTAAAGCAGAAACTGGTCAAACAGTG
GCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTGATTCCACGTTTCTACGACGTGTCAGCAGGAGA
AATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGTGACAGCTCATGCTGGTCAAAGGGTTGCCATTGTTG
GGCCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAATTCTATGAGATTGATAAGAGAAGTATTCGCATT
GATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCCTTTTCAATGGTCTTGCAGGATACCTGGCTCTT
TGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAGTGATGAACGAATGATGGAAGCTAGTAAGGCTG
TGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCATCTTGGATGACACCGTGACCTTGTCTGTAGGA
CAAAAACAACTATTGACTATTGCTCGTGCCCTTCTTAAGGATGCACCGCTTTTGATTTTGGATGAGGCGACTTCTTCTGT
TGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGATGGAAGGACGCACATTCTTTGTCATTGCCCACC
GCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAGCAAGGCAACTATGAGGAA
CTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGATGAAGCAGAAGAATAA

Domains


Predicted by InterproScan.

(68-117)

(120-265)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

79.464

65.306

0.519

  rcrP Streptococcus mutans UA159

37.861

100

0.382


Multiple sequence alignment