Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | BV884_RS17140 | Genome accession | NZ_CP019114 |
| Coordinates | 3561062..3561487 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain MDR-CQ | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3556062..3566487
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV884_RS17110 (BV884_17190) | - | 3556590..3557624 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| BV884_RS17115 (BV884_17195) | - | 3557739..3558680 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| BV884_RS17120 (BV884_17200) | rplS | 3558733..3559101 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| BV884_RS17125 (BV884_17205) | trmD | 3559310..3560050 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BV884_RS17130 (BV884_17210) | rimM | 3560096..3560644 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| BV884_RS17135 (BV884_17215) | rpsP | 3560664..3560915 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| BV884_RS17140 (BV884_17220) | pilE | 3561062..3561487 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| BV884_RS17145 (BV884_17225) | pilY2 | 3561484..3561966 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| BV884_RS17150 (BV884_17230) | pilY1 | 3561979..3565833 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=213174 BV884_RS17140 WP_000788342.1 3561062..3561487(-) (pilE) [Acinetobacter baumannii strain MDR-CQ]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=213174 BV884_RS17140 WP_000788342.1 3561062..3561487(-) (pilE) [Acinetobacter baumannii strain MDR-CQ]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |