Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | BG259_RS09590 | Genome accession | NZ_CP018680 |
| Coordinates | 2027650..2028264 (+) | Length | 204 a.a. |
| NCBI ID | WP_005446268.1 | Uniprot ID | A0A9X3MGU4 |
| Organism | Vibrio harveyi strain QT520 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2022650..2033264
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG259_RS09570 (BG259_09570) | - | 2022936..2023853 (-) | 918 | WP_005446278.1 | ABC transporter ATP-binding protein | - |
| BG259_RS09575 (BG259_09575) | - | 2024087..2025757 (-) | 1671 | WP_074050811.1 | SulP family inorganic anion transporter | - |
| BG259_RS09580 (BG259_09580) | can | 2026041..2026709 (+) | 669 | WP_005446273.1 | carbonate dehydratase | - |
| BG259_RS09585 (BG259_09585) | hpt | 2026798..2027328 (-) | 531 | WP_005446271.1 | hypoxanthine phosphoribosyltransferase | - |
| BG259_RS09590 (BG259_09590) | opaR | 2027650..2028264 (+) | 615 | WP_005446268.1 | transcriptional regulator OpaR | Regulator |
| BG259_RS09595 (BG259_09595) | lpdA | 2028586..2030016 (-) | 1431 | WP_005446266.1 | dihydrolipoyl dehydrogenase | - |
| BG259_RS09600 (BG259_09600) | aceF | 2030260..2032161 (-) | 1902 | WP_050921460.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23559.82 Da Isoelectric Point: 6.0756
>NTDB_id=209629 BG259_RS09590 WP_005446268.1 2027650..2028264(+) (opaR) [Vibrio harveyi strain QT520]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHEPE
HLANLFHGICYSIFVQANRSKSEAELSTLVSAYLDMLCIYNRDH
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHEPE
HLANLFHGICYSIFVQANRSKSEAELSTLVSAYLDMLCIYNRDH
Nucleotide
Download Length: 615 bp
>NTDB_id=209629 BG259_RS09590 WP_005446268.1 2027650..2028264(+) (opaR) [Vibrio harveyi strain QT520]
ATGGACTCAATTGCAAAGAGACCTCGTACTAGGCTTTCCCCTCTAAAACGTAAACAGCAACTAATGGAAATCGCTCTTGA
AGTGTTTGCTCGTCGCGGCATTGGTCGTGGTGGTCACGCTGATATTGCAGAGATTGCTCAAGTTTCTGTTGCGACAGTAT
TTAACTACTTCCCAACTCGCGAAGACTTGGTGGATGAAGTTCTGAATCACGTGGTTCGTCAATTCTCGAACTTCTTATCA
GATAACATCGACTTAGACATTCATGCACGCGAGAACATCGCTAACATCACTAACGCAATGATTGAACTAGTAAGCCAAGA
TTGCCATTGGTTGAAAGTTTGGTTCGAGTGGAGTGCATCAACACGTGATGAAGTGTGGCCGCTATTCGTAACGACAAACC
GCACCAACCAACTGCTGGTGCAAAACATGTTCATCAAAGCTATCGAACGTGGGGAAGTTTGTGACCAACATGAACCGGAA
CACTTGGCGAATCTGTTCCATGGTATTTGTTACTCTATCTTCGTACAAGCAAATCGCTCTAAGAGCGAAGCCGAGCTATC
AACACTCGTTAGTGCTTACCTAGATATGTTGTGCATCTACAACCGCGATCACTAA
ATGGACTCAATTGCAAAGAGACCTCGTACTAGGCTTTCCCCTCTAAAACGTAAACAGCAACTAATGGAAATCGCTCTTGA
AGTGTTTGCTCGTCGCGGCATTGGTCGTGGTGGTCACGCTGATATTGCAGAGATTGCTCAAGTTTCTGTTGCGACAGTAT
TTAACTACTTCCCAACTCGCGAAGACTTGGTGGATGAAGTTCTGAATCACGTGGTTCGTCAATTCTCGAACTTCTTATCA
GATAACATCGACTTAGACATTCATGCACGCGAGAACATCGCTAACATCACTAACGCAATGATTGAACTAGTAAGCCAAGA
TTGCCATTGGTTGAAAGTTTGGTTCGAGTGGAGTGCATCAACACGTGATGAAGTGTGGCCGCTATTCGTAACGACAAACC
GCACCAACCAACTGCTGGTGCAAAACATGTTCATCAAAGCTATCGAACGTGGGGAAGTTTGTGACCAACATGAACCGGAA
CACTTGGCGAATCTGTTCCATGGTATTTGTTACTCTATCTTCGTACAAGCAAATCGCTCTAAGAGCGAAGCCGAGCTATC
AACACTCGTTAGTGCTTACCTAGATATGTTGTGCATCTACAACCGCGATCACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
95.588 |
100 |
0.956 |
| hapR | Vibrio cholerae C6706 |
71.717 |
97.059 |
0.696 |
| hapR | Vibrio cholerae strain A1552 |
71.717 |
97.059 |
0.696 |