Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | BBX32_RS00940 | Genome accession | NZ_CP018677 |
| Coordinates | 174542..174967 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain LAC4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 169542..179967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBX32_RS00910 (BBX32_00920) | - | 170072..171106 (+) | 1035 | WP_001189446.1 | lipase secretion chaperone | - |
| BBX32_RS00915 (BBX32_00925) | - | 171221..172162 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| BBX32_RS00920 (BBX32_00930) | rplS | 172214..172582 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| BBX32_RS00925 (BBX32_00935) | trmD | 172790..173530 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BBX32_RS00930 (BBX32_00940) | rimM | 173576..174124 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| BBX32_RS00935 (BBX32_00945) | rpsP | 174144..174395 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| BBX32_RS00940 (BBX32_00950) | pilE | 174542..174967 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| BBX32_RS00945 (BBX32_00955) | pilY2 | 174964..175446 (-) | 483 | WP_001046421.1 | type IV pilin protein | Machinery gene |
| BBX32_RS00950 (BBX32_00960) | pilY1 | 175459..179313 (-) | 3855 | WP_000768944.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=209574 BBX32_RS00940 WP_000788337.1 174542..174967(-) (pilE) [Acinetobacter baumannii strain LAC4]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=209574 BBX32_RS00940 WP_000788337.1 174542..174967(-) (pilE) [Acinetobacter baumannii strain LAC4]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |