Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   CO687_RS07770 Genome accession   NZ_CP023511
Coordinates   1573306..1575042 (+) Length   578 a.a.
NCBI ID   WP_048780045.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS_371     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1568306..1580042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO687_RS07740 (CO687_07740) - 1570092..1570217 (-) 126 Protein_1464 IS110 family transposase -
  CO687_RS07745 (CO687_07745) tnpA 1570360..1570785 (+) 426 Protein_1465 IS200/IS605 family transposase -
  CO687_RS10655 (CO687_07750) - 1570912..1571587 (-) 676 Protein_1466 transposase -
  CO687_RS07755 (CO687_07755) - 1571809..1572027 (+) 219 WP_081105916.1 HNH/ENDO VII family nuclease -
  CO687_RS07760 (CO687_07760) - 1572027..1572431 (+) 405 WP_061583769.1 SMI1/KNR4 family protein -
  CO687_RS07765 (CO687_07765) - 1572581..1573042 (+) 462 WP_060553563.1 hypothetical protein -
  CO687_RS07770 (CO687_07770) rcrP 1573306..1575042 (+) 1737 WP_048780045.1 ABC transporter ATP-binding protein Regulator
  CO687_RS07775 (CO687_07775) rcrQ 1575052..1576830 (+) 1779 WP_096755225.1 ABC transporter ATP-binding protein Regulator
  CO687_RS07780 (CO687_07780) - 1576886..1577440 (+) 555 WP_008808625.1 GNAT family N-acetyltransferase -
  CO687_RS07785 (CO687_07785) brnQ 1577590..1578915 (+) 1326 WP_061595867.1 branched-chain amino acid transport system II carrier protein -
  CO687_RS07790 (CO687_07790) - 1579080..1579748 (+) 669 WP_060971050.1 hypothetical protein -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 65270.29 Da        Isoelectric Point: 5.2111

>NTDB_id=207863 CO687_RS07770 WP_048780045.1 1573306..1575042(+) (rcrP) [Streptococcus gordonii strain FDAARGOS_371]
MKYIWSYLRRYPKWLLLDFLGAIFFVVVNLGLPTVLARMIDEGINQGDTSRLYFWAFIMLLVIVAGVFGRIVLSYAAGKL
TTSMVRDMRNDLYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFAEQSLKMGVITPMMMLSSVFMIFLTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQKTLDKINQYARENLTGLRVIRAFAREEFQEERFASENEIYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALQPLGSGELRIGDLVAFIEYSFHALLSFLFLSSLFTMYPRTAVSSERLKEVMDMPISINPNE
DGITETESHGYLEFDNVTFAYPGETESPVLHNISFKAKPGETVAFIGSTGSGKSSLVQLIPRFYDVTLGKILVDGVDVRD
YQLKALRQKIGFIPQKALLFTGTIAENLRYGKEDASHEELNQAADVAQAKEFIESREERFETHLAEGGSNLSGGQKQRLS
IARAVVKEPDIYIFDDSFSALDYKTDAILRRRLKEVTQNATVLIVAQRVGTIMDADQIIVLDKGEIVGRGRHEELMESNA
IYREIAQSQLNSQSLTEE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=207863 CO687_RS07770 WP_048780045.1 1573306..1575042(+) (rcrP) [Streptococcus gordonii strain FDAARGOS_371]
ATGAAATATATTTGGTCTTATTTAAGAAGATATCCTAAATGGCTCTTATTGGATTTCCTAGGAGCGATTTTCTTTGTCGT
TGTAAATTTAGGTCTTCCTACAGTTCTTGCTCGTATGATTGATGAGGGGATTAACCAAGGAGATACCAGTCGTCTGTATT
TTTGGGCATTTATAATGTTATTAGTTATTGTAGCAGGCGTCTTTGGAAGAATTGTCCTGTCCTATGCGGCTGGTAAATTA
ACAACTAGTATGGTTCGTGATATGAGAAATGATCTTTACGCTAAGCTACAAGAGTATTCTCATCATGAATATGAACAGAT
TGGTGTGTCTTCGCTAGTGACACGGATTACAAGTGATGCTTTTGTTCTCATGCAATTTGCTGAGCAGAGCTTAAAAATGG
GGGTTATTACACCCATGATGATGCTTTCAAGTGTTTTTATGATCTTTTTAACAAGTCCGTCCTTGGCTTGGATTGTCGCT
ATTTCCCTTCCTTTTTTGGCGGTAGTGGTTTGGTATGTGGCTGTTAAGACACGTCCTCTATCAGAGAAGCAGCAAAAAAC
TTTGGATAAAATTAACCAATATGCTCGGGAAAATTTAACAGGTTTACGGGTCATTCGTGCATTTGCAAGAGAAGAGTTTC
AAGAGGAGCGCTTTGCTTCAGAAAATGAAATCTATGCTGACAATTCCAATAAATTGTTCAAACTGACAGGATTAACAGAA
CCTTTATTTGTTCAAATCATTATTGCCATGATTGTCGCTATTGTTTGGTTTGCTTTGCAGCCTTTAGGAAGTGGTGAATT
AAGAATTGGTGACTTGGTTGCCTTTATTGAGTACAGTTTTCATGCTTTACTGTCTTTCTTATTTTTATCAAGTCTCTTTA
CCATGTATCCTAGAACAGCCGTCTCTAGTGAGCGTCTAAAGGAAGTTATGGATATGCCTATCTCCATTAATCCTAATGAA
GATGGTATTACTGAAACTGAAAGCCATGGTTATCTAGAGTTTGACAATGTAACCTTTGCTTATCCAGGGGAGACGGAGAG
CCCGGTCCTTCATAATATTTCTTTCAAGGCCAAACCTGGTGAAACTGTTGCCTTTATTGGTTCTACAGGATCAGGTAAGT
CTTCCTTAGTACAATTGATACCACGTTTTTATGATGTTACTCTAGGGAAAATTTTGGTAGATGGAGTTGATGTTCGAGAC
TATCAACTTAAAGCCTTGCGTCAAAAGATTGGTTTCATTCCCCAAAAAGCTCTGCTATTTACAGGTACCATCGCAGAAAA
CTTGAGGTATGGTAAAGAAGATGCCAGTCATGAAGAACTAAATCAAGCTGCAGATGTGGCTCAAGCTAAAGAATTTATCG
AAAGTCGTGAGGAGCGATTTGAAACACACCTGGCTGAAGGAGGAAGCAATCTTTCTGGAGGTCAAAAACAACGTCTGTCA
ATCGCTCGTGCTGTTGTAAAAGAGCCGGATATATATATATTTGATGATTCGTTTTCAGCTCTCGACTACAAGACGGATGC
TATCTTACGTCGTCGTTTGAAAGAAGTAACCCAGAATGCAACGGTTTTAATCGTTGCCCAGCGGGTTGGCACGATTATGG
ATGCAGATCAAATTATCGTTTTGGATAAGGGTGAAATCGTTGGTCGGGGAAGACATGAAGAACTCATGGAATCCAATGCC
ATTTATCGAGAAATTGCCCAATCCCAGCTTAACAGTCAGTCATTAACAGAAGAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-279)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.561

93.772

0.362

Multiple sequence alignment