Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CO687_RS07240 Genome accession   NZ_CP023511
Coordinates   1472928..1474664 (+) Length   578 a.a.
NCBI ID   WP_096755187.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS_371     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1467928..1479664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO687_RS07220 (CO687_07220) - 1468019..1468384 (+) 366 WP_096755183.1 VOC family protein -
  CO687_RS07225 (CO687_07225) asnS 1468406..1469752 (+) 1347 WP_096755184.1 asparagine--tRNA ligase -
  CO687_RS07230 (CO687_07230) - 1469912..1471099 (+) 1188 WP_096755185.1 MFS transporter -
  CO687_RS07235 (CO687_07235) - 1471196..1472938 (+) 1743 WP_096755186.1 ABC transporter ATP-binding protein -
  CO687_RS07240 (CO687_07240) rcrQ 1472928..1474664 (+) 1737 WP_096755187.1 ABC transporter ATP-binding protein Regulator
  CO687_RS07245 (CO687_07245) - 1474740..1476290 (-) 1551 WP_253678840.1 ATP-binding cassette domain-containing protein -
  CO687_RS07250 (CO687_07250) - 1476648..1477616 (-) 969 WP_096755188.1 NAD(P)/FAD-dependent oxidoreductase -
  CO687_RS07255 (CO687_07255) - 1477728..1479044 (-) 1317 WP_096755189.1 FAD-containing oxidoreductase -
  CO687_RS07260 (CO687_07260) - 1479237..1479590 (+) 354 WP_096755190.1 DUF1304 domain-containing protein -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64403.28 Da        Isoelectric Point: 6.1863

>NTDB_id=207858 CO687_RS07240 WP_096755187.1 1472928..1474664(+) (rcrQ) [Streptococcus gordonii strain FDAARGOS_371]
MKHKTSPSSLRRLTRDLLQARWLFLLASLGTVAQVALTVLLPVLIGNAVDSVLLPQADQHLMPILGQMLLVILANTLIQW
LNPLLYNQLVYRYSQQLRQGVIKKVHYLPLAYLDRQGTGDLVSRVTTDLEQLSNGLLMVFNQFFVGLLTILVTIISMAQL
DFFLLLLVLLLTPLSLFLARFIARKSFSFFQRQTQARGAQTQLIEESLTQESLIQAFNAQEQFDTAFTRSNQIYADYSQA
AIFYSSTVNPSTRFINALIYALIVGFGAVRIIQGTGFTVGQLVTFLNYVNQYTKPFNDISSVMSELQSALACAERIYSVL
DQEEIAESGQEILQSEDVKGQISFEHVAFGYDPGKELIQDLNIRIPAASKVAIVGPTGAGKSTLINLLMRFYNVDSGLIS
LDGTPITHYTRASYRQQFGMVLQETWLKTATIHDNIAFGRPDASREEVIAAAKAANAHFFIQQLPQGYDTYLADAGDSLS
QGQRQLLTIARVFLAVPKILILDEATSSIDTRTEVLIQEAFSKLMVGRTSFIIAHRLSTIQNADIILVMVDGNIVEHGNH
QELIDAKGVYYQMQTAQE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=207858 CO687_RS07240 WP_096755187.1 1472928..1474664(+) (rcrQ) [Streptococcus gordonii strain FDAARGOS_371]
ATGAAGCATAAGACATCACCTAGCAGCTTGAGGCGTTTGACTCGAGACTTGCTGCAGGCGCGCTGGCTCTTTCTCCTAGC
TAGTCTGGGAACGGTGGCTCAAGTGGCTCTAACTGTTCTTCTCCCAGTTTTAATCGGGAATGCGGTTGATAGTGTTCTTC
TTCCGCAAGCGGACCAGCATTTGATGCCGATTTTGGGCCAGATGTTGTTGGTTATCTTAGCCAATACGCTGATTCAGTGG
CTCAATCCCTTGCTCTATAATCAGCTGGTCTATCGCTATAGCCAGCAACTCCGGCAAGGTGTTATCAAGAAAGTTCATTA
TCTGCCTTTGGCTTATCTGGACCGGCAGGGAACAGGTGATTTGGTTAGTCGGGTGACGACTGATTTGGAGCAGCTCAGCA
ATGGTTTGCTTATGGTTTTTAATCAGTTTTTTGTGGGTTTGCTAACAATTTTAGTGACCATAATTAGTATGGCTCAGTTG
GACTTTTTCCTCTTGCTTTTGGTTCTGCTTTTGACGCCCCTTTCTCTCTTCTTAGCTCGCTTTATTGCCAGAAAGAGTTT
TAGCTTTTTCCAACGACAGACACAGGCGAGGGGAGCACAGACCCAGCTGATTGAGGAAAGTTTGACTCAAGAAAGTCTGA
TCCAGGCCTTTAATGCTCAGGAGCAGTTTGATACAGCTTTTACCCGCAGTAATCAAATCTATGCAGACTATTCGCAGGCG
GCTATTTTCTATTCATCAACAGTCAATCCTTCGACTCGTTTTATCAATGCCCTGATCTATGCTTTGATTGTAGGCTTTGG
GGCTGTCCGAATCATTCAGGGAACAGGTTTTACGGTTGGGCAGCTGGTAACTTTTCTCAACTATGTCAACCAGTACACCA
AGCCTTTCAATGATATTTCGTCTGTCATGTCAGAATTGCAGAGCGCTTTAGCTTGTGCAGAGCGAATTTACAGCGTTTTG
GACCAAGAAGAAATAGCAGAGTCAGGTCAAGAAATTCTTCAGTCTGAAGATGTCAAAGGACAGATTAGCTTTGAGCATGT
GGCTTTTGGCTATGACCCTGGCAAAGAGCTGATTCAGGATTTGAATATAAGGATTCCAGCAGCTAGCAAGGTCGCAATTG
TCGGGCCAACTGGTGCTGGTAAGTCAACCCTGATCAATCTCCTCATGCGCTTTTACAATGTAGACAGTGGTCTTATTTCG
CTAGACGGTACTCCCATCACGCATTACACCAGAGCCTCTTATCGCCAGCAGTTTGGTATGGTACTGCAAGAGACTTGGCT
CAAGACGGCGACCATTCACGACAACATAGCCTTTGGCCGGCCAGACGCTAGCCGAGAAGAGGTCATTGCAGCTGCTAAGG
CAGCCAATGCTCATTTCTTTATCCAGCAGCTTCCTCAGGGTTATGACACCTATCTGGCGGATGCCGGGGACTCCCTGTCT
CAAGGTCAGCGGCAGCTCTTGACTATTGCCCGTGTCTTCTTGGCTGTTCCTAAAATCCTAATCTTGGACGAGGCGACTTC
CTCTATTGATACCCGAACAGAAGTTTTGATTCAGGAGGCTTTCAGCAAGCTCATGGTGGGACGGACTAGCTTTATCATCG
CCCACCGTCTGTCTACTATTCAAAATGCTGACATCATCCTCGTCATGGTAGATGGCAATATCGTCGAACATGGTAATCAC
CAGGAGCTCATAGATGCCAAAGGTGTTTATTACCAAATGCAGACGGCGCAGGAGTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(27-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.693

97.924

0.379

Multiple sequence alignment