Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | BS064_RS01950 | Genome accession | NZ_CP018254 |
| Coordinates | 413598..414023 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788343.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AF-401 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 408598..419023
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS064_RS01940 (BS064_01930) | - | 409253..413106 (+) | 3854 | Protein_364 | PilC/PilY family type IV pilus protein | - |
| BS064_RS01945 (BS064_01935) | pilY2 | 413119..413601 (+) | 483 | WP_001046422.1 | type IV pilin protein | Machinery gene |
| BS064_RS01950 (BS064_01940) | pilE | 413598..414023 (+) | 426 | WP_000788343.1 | type IV pilin protein | Machinery gene |
| BS064_RS01955 (BS064_01945) | rpsP | 414170..414421 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| BS064_RS01960 (BS064_01950) | rimM | 414441..414989 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| BS064_RS01965 (BS064_01955) | trmD | 415035..415775 (+) | 741 | WP_000464596.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BS064_RS01970 (BS064_01960) | rplS | 415983..416351 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| BS064_RS01975 (BS064_01965) | - | 416404..417345 (-) | 942 | WP_085943440.1 | lipase family alpha/beta hydrolase | - |
| BS064_RS01980 (BS064_01970) | - | 417460..418494 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15244.43 Da Isoelectric Point: 7.1297
>NTDB_id=207679 BS064_RS01950 WP_000788343.1 413598..414023(+) (pilE) [Acinetobacter baumannii strain AF-401]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=207679 BS064_RS01950 WP_000788343.1 413598..414023(+) (pilE) [Acinetobacter baumannii strain AF-401]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.872 |
100 |
0.979 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |