Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CO204_RS05935 Genome accession   NZ_CP023477
Coordinates   1142620..1144374 (-) Length   584 a.a.
NCBI ID   WP_002275251.1    Uniprot ID   -
Organism   Streptococcus mutans strain LAR01     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1137620..1149374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO204_RS05905 (CO204_05890) - 1138146..1138496 (+) 351 WP_002263648.1 DUF1304 domain-containing protein -
  CO204_RS05910 (CO204_05895) - 1138553..1139785 (-) 1233 WP_002269551.1 HAMP domain-containing sensor histidine kinase -
  CO204_RS05915 (CO204_05900) - 1139791..1140477 (-) 687 WP_002263646.1 response regulator transcription factor -
  CO204_RS05920 (CO204_05905) - 1140478..1141101 (-) 624 WP_002268771.1 GTP pyrophosphokinase family protein -
  CO204_RS05925 (CO204_05910) - 1141331..1141801 (-) 471 WP_019313204.1 hypothetical protein -
  CO204_RS05930 (CO204_05915) tpx 1141938..1142423 (-) 486 WP_002266461.1 thiol peroxidase -
  CO204_RS05935 (CO204_05920) rcrQ 1142620..1144374 (-) 1755 WP_002275251.1 ABC transporter ATP-binding protein Regulator
  CO204_RS05940 (CO204_05925) rcrP 1144364..1146166 (-) 1803 WP_019313203.1 ABC transporter ATP-binding protein Regulator
  CO204_RS05945 (CO204_05930) rcrR 1146170..1146604 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  CO204_RS05950 (CO204_05935) queC 1147167..1147820 (+) 654 WP_106006754.1 7-cyano-7-deazaguanine synthase QueC -
  CO204_RS05955 (CO204_05940) queD 1147820..1148266 (+) 447 WP_002265145.1 6-carboxytetrahydropterin synthase QueD -
  CO204_RS05960 (CO204_05945) queE 1148263..1148979 (+) 717 WP_173677994.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64577.58 Da        Isoelectric Point: 5.7674

>NTDB_id=207440 CO204_RS05935 WP_002275251.1 1142620..1144374(-) (rcrQ) [Streptococcus mutans strain LAR01]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAAIILLIGSIFMM
IKTNGALAATAILSVFAGFVVSTVIMAKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKKQFENLNDQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEEIEDENHKVKQLEKVEGNVNFDNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIVNLLMRFYEVDRGM
ISIDGVNIHDMTREEVHDAFAMVLQDTWLFEGTVKENLIYNQKHITDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=207440 CO204_RS05935 WP_002275251.1 1142620..1144374(-) (rcrQ) [Streptococcus mutans strain LAR01]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTCTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGACAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTATAATTCTCCTGATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGGTATCCACTGTTATCATGGC
CAAGAGTCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCCGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTACAATGCGATTCAGCAAAGCAAGAAGCAGTTTGAAAACTTGAATGACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGAATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCTTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAATGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGAAATAGAAGACGAAAACCATAAAGTTAAACAACTTGAAAAAGTTGAAGGAAATGTTAATTTTGA
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTGTTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTCTATTGATGGAGTTAATATCCATGATATGACACGAGAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAGTTAAGGAAAATCTGATTTATAATCAAAAACATATTACTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCACGTGCTCTTCTTAAAGATGCACCGCTTCTGATTCTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATTCTTGTCATGAGAGATGGTAATATTATTGAACAAGGTAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

99.658

100

0.997