Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CO204_RS05245 Genome accession   NZ_CP023477
Coordinates   1003542..1005287 (+) Length   581 a.a.
NCBI ID   WP_002283054.1    Uniprot ID   -
Organism   Streptococcus mutans strain LAR01     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 998542..1010287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO204_RS05225 (CO204_05215) glyA 998950..1000212 (+) 1263 WP_002266756.1 serine hydroxymethyltransferase -
  CO204_RS05230 (CO204_05220) - 1000209..1001186 (+) 978 WP_019313242.1 nucleoid-associated protein -
  CO204_RS05235 (CO204_05225) - 1001188..1001802 (+) 615 WP_002262260.1 lysozyme family protein -
  CO204_RS05240 (CO204_05230) - 1001812..1003545 (+) 1734 WP_002288339.1 ABC transporter ATP-binding protein -
  CO204_RS05245 (CO204_05235) rcrQ 1003542..1005287 (+) 1746 WP_002283054.1 ABC transporter ATP-binding protein Regulator
  CO204_RS05250 (CO204_05240) - 1005418..1007133 (-) 1716 WP_002262263.1 phospho-sugar mutase -
  CO204_RS05255 (CO204_05245) - 1007228..1007800 (-) 573 WP_002262264.1 ECF transporter S component -
  CO204_RS05260 (CO204_05250) coaC 1007875..1008414 (-) 540 WP_002262265.1 phosphopantothenoylcysteine decarboxylase -
  CO204_RS05265 (CO204_05255) - 1008407..1009093 (-) 687 WP_019313241.1 phosphopantothenate--cysteine ligase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65273.90 Da        Isoelectric Point: 9.3147

>NTDB_id=207432 CO204_RS05245 WP_002283054.1 1003542..1005287(+) (rcrQ) [Streptococcus mutans strain LAR01]
MKARNNKNTLKRLTADFLKQRILVFLALLGTLIQVSLTVYLPVLIGQAVDAVLAKNVQKILPTILISMILVVAFNTIIQW
INPLTYNRLVFTYSQELRQNIIEKLYRLPLSYLDKHSSGDLVSRITTDVEQLSNGLLMVFNQFFVGILTILLTIITMAKL
DFFMMILVLVLTPLSLFVARFIAQKSYHLYQRQTRARGAFTQHIEESLRQESLIQSFNAQDQFIHTFDHLNSKYAKYSQG
AIFYSSTVNPATRFINALIYALLAGIGALRIMNGNFTVGQLTTFLNYVTQYTKPFNDISAVLSELQSALACAERLYMILD
EKDAKDDGKKELVSESVKGAIAFDKISFGYDEKQTLIKNLSVNIPQGSKVAIVGPTGAGKSTLINLLMRFYDLREGQILL
DGQAITDYSKASYRQQIGMVLQETWLKTATVLENIAFGYPEASREQVIAAAKAANADFFIKQLPQGYDTFLADAGESLSQ
GQRQLLTIARIFVHIPKILILDEATSSIDTRTEILVQEAFEKLMKGRTSFIIAHRLSTIQSADLILVMVDGNIVEQGNHK
DLMQKKGVYYQMQTAQDSLES

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=207432 CO204_RS05245 WP_002283054.1 1003542..1005287(+) (rcrQ) [Streptococcus mutans strain LAR01]
ATGAAAGCTAGAAATAATAAAAATACCTTAAAGCGCTTGACTGCTGACTTTCTTAAGCAGAGAATTTTGGTTTTTCTTGC
CTTATTGGGTACTTTGATTCAGGTCAGCCTAACGGTTTATCTCCCAGTTCTAATTGGGCAAGCAGTTGATGCTGTTCTTG
CTAAAAATGTCCAGAAAATCTTACCGACAATCTTGATTAGCATGATTCTTGTTGTTGCCTTTAATACCATTATCCAATGG
ATCAATCCCTTGACTTACAATCGTTTGGTTTTCACTTATAGCCAGGAGCTTCGGCAGAATATCATTGAAAAACTTTATCG
CCTCCCTTTATCTTATTTGGATAAGCATTCTTCAGGTGATTTAGTCAGTCGTATAACAACGGATGTTGAACAATTATCCA
ACGGACTTTTAATGGTTTTTAATCAGTTTTTCGTAGGTATTTTGACTATTTTGTTAACCATCATAACAATGGCGAAGCTA
GACTTTTTTATGATGATTTTGGTACTGGTCTTAACACCACTTTCCTTATTTGTTGCTCGTTTTATTGCTCAAAAGAGTTA
TCATCTTTATCAAAGACAAACCAGAGCCAGAGGAGCATTTACTCAACATATTGAGGAGAGTCTTCGTCAGGAAAGTTTGA
TTCAAAGCTTCAATGCTCAAGATCAATTTATTCACACTTTTGATCATCTAAATAGCAAATATGCTAAGTATTCACAAGGT
GCTATTTTCTATTCATCTACAGTCAATCCCGCGACACGTTTTATCAATGCCTTAATTTATGCGCTCTTAGCTGGTATCGG
AGCATTACGCATTATGAATGGGAATTTTACTGTGGGGCAATTGACCACTTTCTTGAATTATGTCACTCAATATACCAAAC
CCTTTAATGACATTTCAGCCGTTCTATCTGAATTACAAAGTGCTTTAGCATGTGCAGAACGTCTCTATATGATTCTTGAT
GAAAAGGATGCTAAGGATGATGGCAAGAAAGAATTAGTCAGTGAATCTGTTAAAGGTGCTATTGCCTTTGATAAGATTAG
TTTTGGTTATGATGAGAAACAAACTCTGATTAAGAATTTGTCTGTCAATATTCCACAAGGTTCCAAAGTGGCTATCGTTG
GTCCTACAGGGGCTGGAAAATCAACTCTCATTAATTTGCTGATGCGATTTTATGATTTGCGAGAAGGGCAAATACTGCTA
GATGGGCAAGCAATCACTGATTATAGTAAAGCTTCTTATCGTCAGCAGATTGGTATGGTCTTACAAGAAACTTGGTTGAA
AACGGCTACTGTTTTGGAAAATATTGCCTTTGGTTATCCTGAAGCTAGCCGCGAGCAAGTGATTGCAGCGGCAAAAGCAG
CTAATGCCGACTTTTTTATAAAACAACTTCCTCAAGGTTACGATACTTTTTTGGCCGATGCAGGAGAATCCCTATCACAA
GGGCAAAGGCAATTGTTAACGATAGCACGAATTTTTGTTCATATTCCTAAAATATTAATCTTGGATGAAGCAACTTCCTC
CATTGATACACGAACAGAAATCTTGGTCCAAGAAGCATTTGAAAAGCTTATGAAAGGACGGACCAGCTTTATTATTGCAC
ATAGATTGTCAACTATTCAAAGCGCAGACCTTATCTTAGTTATGGTAGATGGCAATATTGTTGAACAAGGAAATCATAAA
GACTTGATGCAGAAAAAAGGTGTCTATTATCAAATGCAGACAGCACAGGATAGCCTTGAAAGCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(24-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.225

100

0.386