Detailed information NTG0207150

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: Bateq7PJ16_RS06570
• Genome accession: NZ_CP023409
• Coordinates: 1270056..1270973 (+)
• Length: 305 a.a.
• NCBI ID: WP_003232954.1
• Uniprot ID: A0A9W5LHY5
• Organism: Bacillus subtilis strain 7PJ-16
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1265056..1275973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Bateq7PJ16_RS06555 (Bateq7PJ16_1269)	trpS	1265637..1266629 (-)	993	WP_003245134.1	tryptophan--tRNA ligase	-
Bateq7PJ16_RS06560 (Bateq7PJ16_1270)	oppA	1267373..1269010 (+)	1638	WP_072173824.1	oligopeptide ABC transporter substrate-binding protein OppA	-
Bateq7PJ16_RS06565 (Bateq7PJ16_1271)	oppB	1269117..1270052 (+)	936	WP_014479444.1	oligopeptide ABC transporter permease OppB	-
Bateq7PJ16_RS06570 (Bateq7PJ16_1272)	amiD	1270056..1270973 (+)	918	WP_003232954.1	oligopeptide ABC transporter permease OppC	Regulator
Bateq7PJ16_RS06575 (Bateq7PJ16_1273)	oppD	1270978..1272054 (+)	1077	WP_077670618.1	oligopeptide ABC transporter ATP-binding protein OppD	-
Bateq7PJ16_RS06580 (Bateq7PJ16_1274)	oppF	1272056..1272973 (+)	918	WP_003239287.1	oligopeptide ABC transporter ATP-binding protein OppF	-
Bateq7PJ16_RS06585 (Bateq7PJ16_1276)	yjbB	1273080..1274297 (+)	1218	WP_124048307.1	MFS transporter	-
Bateq7PJ16_RS06590 (Bateq7PJ16_1277)	yjbC	1274462..1275040 (+)	579	WP_003224597.1	GNAT family N-acetyltransferase	-
Bateq7PJ16_RS06595 (Bateq7PJ16_1278)	spx	1275221..1275616 (+)	396	WP_014476435.1	transcriptional regulator Spx	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33621.12 Da
• Isoelectric Point: 10.2873

>NTDB_id=207150 Bateq7PJ16_RS06570 WP_003232954.1 1270056..1270973(+) (amiD) [Bacillus subtilis strain 7PJ-16]
MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIIIVLIILMAIFAPMFSRYDYSTTNLLNADKPP
SKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMV
VLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEA
FLSYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=207150 Bateq7PJ16_RS06570 WP_003232954.1 1270056..1270973(+) (amiD) [Bacillus subtilis strain 7PJ-16]
ATGCAGAACATTCCAAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGGCGATGCAGAAAAAATAAGTAAAAAGAGCCT
TTCCCTCTGGAAAGATGCGATGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATCATTATCGTACTTATTA
TCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATGATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCGCCT
TCAAAAGATCACTGGTTCGGAACAGATGATCTTGGACGGGACATTTTCGTCCGTACATGGGTAGGGGCGCGAATCTCAAT
CTTTATCGGTGTTGCAGCCGCTGTTCTTGATTTGCTGATCGGTGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGCA
GAACGGACGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTT
GTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGG
ACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTTGCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTCTGTTTA
AACATATCGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTCCTACTGCAATTTTCACAGAAGCC
TTTTTAAGCTATTTGGGACTTGGTGTTCCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGCATT
GACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCATTACAATGTTTGGTTTCAACGTTGTCGGCGACG
GATTAAGAGACGCATTGGATCCTAAGTTACGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-79)

3D structure

• AlphaFold DB: A0A9W5LHY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	35.922	100	0.364
amiD	Streptococcus thermophilus LMD-9	35.922	100	0.364