Detailed information NTG0207028

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: BSL056_RS07845
• Genome accession: NZ_CP018197
• Coordinates: 1570288..1571067 (+)
• Length: 259 a.a.
• NCBI ID: WP_007499612.1
• Uniprot ID: A0A9X0FX88
• Organism: Bacillus safensis strain KCTC 12796BP
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1565288..1576067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSL056_RS07825 (BSL056_07850)	trmFO	1565992..1567296 (+)	1305	WP_073205170.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
BSL056_RS07830 (BSL056_07855)	xerC	1567359..1568276 (+)	918	WP_024424182.1	tyrosine recombinase XerC	-
BSL056_RS07835 (BSL056_07860)	hslV	1568291..1568836 (+)	546	WP_024424181.1	ATP-dependent protease subunit HslV	-
BSL056_RS07840 (BSL056_07865)	hslU	1568853..1570253 (+)	1401	WP_024424180.1	HslU--HslV peptidase ATPase subunit	-
BSL056_RS07845 (BSL056_07870)	codY	1570288..1571067 (+)	780	WP_007499612.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
BSL056_RS07850 (BSL056_07875)	flgB	1571356..1571745 (+)	390	WP_012009952.1	flagellar basal body rod protein FlgB	-
BSL056_RS07855 (BSL056_07880)	flgC	1571745..1572197 (+)	453	WP_024424179.1	flagellar basal body rod protein FlgC	-
BSL056_RS07860 (BSL056_07885)	fliE	1572209..1572526 (+)	318	WP_025092577.1	flagellar hook-basal body complex protein FliE	-
BSL056_RS07865 (BSL056_07890)	fliF	1572576..1574168 (+)	1593	WP_073205172.1	flagellar basal-body MS-ring/collar protein FliF	-
BSL056_RS07870 (BSL056_07895)	fliG	1574180..1575196 (+)	1017	WP_024424176.1	flagellar motor switch protein FliG	-
BSL056_RS07875 (BSL056_07900)	fliH	1575189..1575953 (+)	765	WP_073205175.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 28976.19 Da
• Isoelectric Point: 4.6467

>NTDB_id=207028 BSL056_RS07845 WP_007499612.1 1570288..1571067(+) (codY) [Bacillus safensis strain KCTC 12796BP]
MALLQKTRIINSMLQDAAGKPVNFKEMAETLRDVIDSNIFVLSRRGKLLGYSINQQIENARMKKMLEDRQFPEEYTKSLF
NVPETSSNLDINSEYTAFPIENRDLFQSGLTTIVPIIGGGDRLGTLILSRLQDTFTDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=207028 BSL056_RS07845 WP_007499612.1 1570288..1571067(+) (codY) [Bacillus safensis strain KCTC 12796BP]
ATGGCGTTACTACAAAAAACAAGGATTATTAACTCAATGCTGCAAGATGCAGCGGGGAAACCAGTTAATTTCAAAGAAAT
GGCAGAAACACTGAGAGATGTCATTGATTCAAACATTTTCGTATTAAGCAGAAGGGGAAAGCTTCTTGGCTACTCCATTA
ATCAACAGATCGAAAATGCACGTATGAAAAAAATGCTTGAAGATCGTCAGTTCCCTGAAGAATATACAAAGAGTCTATTC
AATGTCCCTGAAACGTCTTCAAACCTTGATATTAACAGTGAATATACAGCTTTCCCGATTGAAAACCGGGACTTATTCCA
ATCAGGTTTAACAACAATTGTTCCAATTATCGGCGGAGGAGATCGTTTAGGTACGTTAATCCTGTCCCGCTTACAAGATA
CATTCACAGATGATGATTTAATTCTTGCTGAATACGGGGCAACAGTTGTTGGAATGGAGATTCTTCGCGAGAAAGCAGAG
GAAATCGAAGAAGAAGCAAGAAGTAAAGCGGTTGTTCAAATGGCGATTAGCTCTCTTTCCTACAGTGAGCTTGAAGCGAT
TGAGCACATTTTTGAAGAGCTGGATGGAAACGAAGGTCTTCTCGTTGCAAGTAAAATTGCAGACCGTGTAGGGATCACGC
GCTCAGTGATCGTAAACGCCTTACGTAAGTTAGAAAGTGCAGGCGTGATTGAATCTCGTTCTCTTGGAATGAAGGGAACG
TACATCAAAGTGTTAAACAACAAATTTTTAATTGAACTCGAAAATTTAAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	96.525	100	0.965
codY	Lactococcus lactis subsp. lactis strain DGCC12653	48.031	98.069	0.471