Detailed information NTG0204735

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Aba9201_RS05025
• Genome accession: NZ_CP023020
• Coordinates: 984077..984778 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594590.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 9201
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 979077..989778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba9201_RS04995 (Aba9201_05000)	-	979383..979826 (-)	444	WP_001246674.1	SRPBCC family protein	-
Aba9201_RS05000 (Aba9201_05005)	tadA	979896..980399 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
Aba9201_RS05005 (Aba9201_05010)	-	980406..981530 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Aba9201_RS05010 (Aba9201_05015)	ung	981527..982240 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
Aba9201_RS05015 (Aba9201_05020)	-	982291..982887 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
Aba9201_RS05020 (Aba9201_05025)	gspK	983118..984077 (-)	960	WP_000301471.1	type II secretion system minor pseudopilin GspK	-
Aba9201_RS05025 (Aba9201_05030)	xcpW	984077..984778 (-)	702	WP_000594590.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Aba9201_RS05030 (Aba9201_05035)	xcpV	984778..985158 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Aba9201_RS05035 (Aba9201_05040)	-	985148..985702 (-)	555	WP_000841373.1	type II secretion system protein	-
Aba9201_RS05040 (Aba9201_05045)	-	985712..986320 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Aba9201_RS05045 (Aba9201_05050)	-	986358..987131 (-)	774	WP_000497301.1	TatD family hydrolase	-
Aba9201_RS05050 (Aba9201_05055)	-	987149..987490 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
Aba9201_RS05055 (Aba9201_05060)	-	987502..988482 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
Aba9201_RS05060 (Aba9201_05065)	kdsB	988494..989255 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26627.52 Da
• Isoelectric Point: 9.3468

>NTDB_id=204735 Aba9201_RS05025 WP_000594590.1 984077..984778(-) (xcpW) [Acinetobacter baumannii strain 9201]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWTYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=204735 Aba9201_RS05025 WP_000594590.1 984077..984778(-) (xcpW) [Acinetobacter baumannii strain 9201]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGACTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991