Detailed information NTG0020385

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SPG_1679
• Genome accession: CP001015
• Coordinates: 1618620..1619891 (+)
• Length: 423 a.a.
• NCBI ID: ACF55242.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae G54
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1613620..1624891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPG_1671	-	1613855..1614550 (-)	696	ACF56260.1	ribosomal protein L11 methyltransferase	-
SPG_1672	-	1614685..1615113 (-)	429	ACF56653.1	MutT/nudix family protein	-
SPG_1673	-	1615094..1616182 (-)	1089	ACF55244.1	hypothetical protein	-
SPG_1674	-	1616201..1616671 (-)	471	ACF55984.1	hypothetical protein	-
SPG_1675	-	1616962..1617414 (-)	453	ACF56168.1	conserved hypothetical protein	-
SPG_1676	-	1617451..1617630 (-)	180	ACF55715.1	conserved hypothetical protein	-
SPG_1677	-	1617767..1617946 (-)	180	ACF56192.1	conserved hypothetical protein	-
SPG_1678	-	1618150..1618350 (-)	201	ACF54784.1	conserved hypothetical protein	-
SPG_1679	rarA	1618620..1619891 (+)	1272	ACF55242.1	ATPase, AAA family	Machinery gene
SPG_1681	-	1620438..1621757 (-)	1320	ACF56093.1	sucrose-6-phosphate hydrolase	-
SPG_1682	-	1621767..1622612 (-)	846	ACF56564.1	ABC transporter, permease protein	-
SPG_1683	-	1622614..1623516 (-)	903	ACF55133.1	ABC transporter, permease protein	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 47008.42 Da
• Isoelectric Point: 5.9140

>NTDB_id=20385 SPG_1679 ACF55242.1 1618620..1619891(+) (rarA) [Streptococcus pneumoniae G54]
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIRHITLDIMENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYTARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDHLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=20385 SPG_1679 ACF55242.1 1618620..1619891(+) (rarA) [Streptococcus pneumoniae G54]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGAGCATCTGGTCGGACCTGG
AAAAATCATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTATATGGCCCTCCGGGAATCGGCAAAACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAGCGACTG
CAAGAAATCTCGGAAGAAGCTAAATTTTCTGGTGGTCTCGTCCTATTGCTAGACGAAATTCATCGACTAGATAAGACCAA
GCAAGACTTCCTCTTGCCTCTCTTGGAAAGTGGACTGGTCATCATGATTGGAGCAACGACTGAAAATCCTTTCTTCTCTG
TCACTCCTGCCATTCGTAGCCGTGTTCAAATTTTCGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAGCTCTAAGTAACCCTGAACGTGGTTTTGATTTTCCAATAGAACTAGATGAGGATGCGCTGGATTTCATCGCAACCTC
TACAAACGGAGACCTTCGCTCTGCCTTTAACTCACTGGACTTGGCTGTTCTATCTACCCCTGAGAATGACGAGGGCATTC
GCCACATCACCTTAGACATCATGGAAAATAGTCTTCAGAGAAGCTACATCACTATGGACAAGGATGGAGACGGTCACTAT
GATGTTCTATCTGCCCTGCAAAAGTCTATTCGTGGCTCAGATGTGGATGCCAGTCTCCACTATACTGCCCGCTTGATTGA
GGCTGGGGATCTGCCTAGTCTCGCTCGTCGCTTGACTGTTATCGCCTATGAAGATATCGGCTTAGCCAATCCTGAGGCCC
AGATTCATACCGTGACTGCTCTGGATGCTGCACAAAGGATTGGTTTCCCCGAAGCCCGCATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCCAACTCAGCCTATGTAGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GCACTTGCCTATTCCGCGACACCTACGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGGTAAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCATTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	58.435	96.69	0.565