Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BLD43_RS04365 | Genome accession | NZ_CP017875 |
| Coordinates | 824082..824387 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain ZV1224 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 819082..829387
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLD43_RS04330 (BLD43_04330) | - | 819497..820258 (+) | 762 | WP_025443303.1 | ATP-binding protein | - |
| BLD43_RS04335 (BLD43_04335) | - | 820255..820938 (+) | 684 | WP_002780240.1 | 3-methyladenine DNA glycosylase | - |
| BLD43_RS04340 (BLD43_04340) | thiD | 820938..821750 (+) | 813 | WP_002780241.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BLD43_RS04345 (BLD43_04345) | thiE | 821740..822372 (+) | 633 | WP_002823547.1 | thiamine phosphate synthase | - |
| BLD43_RS04350 (BLD43_04350) | - | 822350..822979 (+) | 630 | WP_002780243.1 | uroporphyrinogen-III synthase | - |
| BLD43_RS04355 (BLD43_04355) | - | 822972..823424 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| BLD43_RS04360 (BLD43_04360) | - | 823421..824089 (-) | 669 | WP_002780245.1 | hypothetical protein | - |
| BLD43_RS04365 (BLD43_04365) | ctsT | 824082..824387 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| BLD43_RS04370 (BLD43_04370) | proC | 824384..825121 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BLD43_RS04375 (BLD43_04375) | fliW | 825121..825510 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| BLD43_RS04380 (BLD43_04380) | - | 825674..826321 (+) | 648 | WP_002780248.1 | outer membrane protein assembly factor BamD | - |
| BLD43_RS04385 (BLD43_04385) | lon | 826337..828712 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| BLD43_RS04390 (BLD43_04390) | rpsR | 828768..829028 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=203474 BLD43_RS04365 WP_002777852.1 824082..824387(-) (ctsT) [Campylobacter coli strain ZV1224]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=203474 BLD43_RS04365 WP_002777852.1 824082..824387(-) (ctsT) [Campylobacter coli strain ZV1224]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |