Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | BLD33_RS01250 | Genome accession | NZ_CP017873 |
| Coordinates | 235896..236492 (+) | Length | 198 a.a. |
| NCBI ID | WP_052780105.1 | Uniprot ID | - |
| Organism | Campylobacter coli strain WA333 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 230896..241492
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLD33_RS01240 (BLD33_01240) | ctsR | 234196..234507 (+) | 312 | WP_002779316.1 | hypothetical protein | Machinery gene |
| BLD33_RS01245 (BLD33_01245) | ctsD | 234485..235903 (+) | 1419 | WP_002779315.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| BLD33_RS01250 (BLD33_01250) | ctsP | 235896..236492 (+) | 597 | WP_052780105.1 | ATP-binding protein | Machinery gene |
| BLD33_RS01255 (BLD33_01255) | - | 236489..237085 (+) | 597 | WP_002779313.1 | CDC27 family protein | - |
| BLD33_RS01260 (BLD33_01260) | ctsE | 237078..238640 (+) | 1563 | WP_002779312.1 | GspE/PulE family protein | Machinery gene |
| BLD33_RS01265 (BLD33_01265) | ctsF | 238627..239802 (+) | 1176 | WP_002781160.1 | type II secretion system F family protein | Machinery gene |
| BLD33_RS01270 (BLD33_01270) | - | 239799..240563 (-) | 765 | WP_002781157.1 | TSUP family transporter | - |
| BLD33_RS01275 (BLD33_01275) | - | 240566..241330 (-) | 765 | WP_002781156.1 | TIGR02757 family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 23661.48 Da Isoelectric Point: 9.1569
>NTDB_id=203435 BLD33_RS01250 WP_052780105.1 235896..236492(+) (ctsP) [Campylobacter coli strain WA333]
MNNIIAFRQECFDQINVLLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
MNNIIAFRQECFDQINVLLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
Nucleotide
Download Length: 597 bp
>NTDB_id=203435 BLD33_RS01250 WP_052780105.1 235896..236492(+) (ctsP) [Campylobacter coli strain WA333]
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGTCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGTCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
57.921 |
100 |
0.591 |