Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   BLD37_RS02735 Genome accession   NZ_CP017868
Coordinates   513759..514274 (+) Length   171 a.a.
NCBI ID   WP_002783936.1    Uniprot ID   A0A5T1ZSK1
Organism   Campylobacter coli strain MG1116     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 508759..519274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLD37_RS02710 (BLD37_02710) - 509215..509553 (+) 339 WP_002777761.1 hypothetical protein -
  BLD37_RS02715 (BLD37_02715) - 509562..510287 (+) 726 WP_002780542.1 phosphatidate cytidylyltransferase -
  BLD37_RS02720 (BLD37_02720) dxr 510284..511360 (+) 1077 WP_002799194.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  BLD37_RS02725 (BLD37_02725) - 511357..512751 (+) 1395 WP_071305081.1 M99 family carboxypeptidase catalytic domain-containing protein -
  BLD37_RS02730 (BLD37_02730) tsaD 512748..513755 (+) 1008 WP_002777752.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  BLD37_RS02735 (BLD37_02735) ctsG 513759..514274 (+) 516 WP_002783936.1 type II secretion system protein Machinery gene
  BLD37_RS02740 (BLD37_02740) - 514274..515524 (+) 1251 WP_071314953.1 DUF2920 family protein -
  BLD37_RS02745 (BLD37_02745) - 515535..517363 (+) 1829 Protein_527 motility associated factor glycosyltransferase family protein -
  BLD37_RS02750 (BLD37_02750) - 517472..517957 (+) 486 WP_321221027.1 flagellin -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18969.97 Da        Isoelectric Point: 8.4861

>NTDB_id=203392 BLD37_RS02735 WP_002783936.1 513759..514274(+) (ctsG) [Campylobacter coli strain MG1116]
MKRAFTILELVFVIVILGILAAIALPKFSSSRDEAEVSKSLNNLKTLINDISIYALKNSHLSTMNFMSNVSGVENVDLNN
FIGIKEVNFRVGEDKECIKLIFIDRNDFVLMGISSNEASKNAIINIANNPKQEFQNLDFTSNSKNKACVALSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=203392 BLD37_RS02735 WP_002783936.1 513759..514274(+) (ctsG) [Campylobacter coli strain MG1116]
GTGAAAAGAGCTTTTACTATATTAGAACTTGTTTTTGTTATCGTGATTTTAGGAATTTTAGCAGCGATTGCTTTGCCAAA
ATTCAGTTCTAGTAGAGATGAAGCTGAAGTGAGTAAATCCTTAAATAATCTTAAAACTTTAATCAATGATATAAGCATCT
ATGCCTTAAAAAATAGTCATTTAAGCACTATGAATTTTATGAGCAATGTAAGTGGAGTAGAAAATGTCGATCTTAACAAT
TTTATAGGCATAAAAGAAGTAAATTTTAGGGTCGGAGAGGATAAAGAGTGTATAAAACTGATTTTCATCGATAGAAATGA
TTTTGTACTGATGGGAATTTCTAGTAATGAAGCAAGCAAAAATGCCATAATCAATATAGCCAATAACCCCAAACAAGAAT
TTCAAAACTTAGATTTTACAAGCAATTCAAAAAATAAAGCTTGCGTGGCACTAAGTAAAAATGAGAATTTTAAAAATTTA
GCCAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T1ZSK1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

77.778

100

0.778

Multiple sequence alignment