Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   BLD42_RS07510 Genome accession   NZ_CP017860
Coordinates   1434398..1435582 (-) Length   394 a.a.
NCBI ID   WP_057031721.1    Uniprot ID   A0A5T0HCR9
Organism   Campylobacter jejuni strain TS1218     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1429398..1440582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLD42_RS07485 (BLD42_07485) fliL 1430547..1431083 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  BLD42_RS07490 (BLD42_07490) acpS 1431083..1431430 (+) 348 WP_002780441.1 holo-ACP synthase -
  BLD42_RS07495 (BLD42_07495) - 1431431..1431850 (-) 420 WP_002780440.1 hypothetical protein -
  BLD42_RS07500 (BLD42_07500) - 1431847..1433208 (-) 1362 WP_032581078.1 cytochrome P450 -
  BLD42_RS07505 (BLD42_07505) - 1433205..1434326 (-) 1122 WP_071169862.1 DUF829 domain-containing protein -
  BLD42_RS07510 (BLD42_07510) kpsS 1434398..1435582 (-) 1185 WP_057031721.1 capsule polysaccharide modification protein KpsS Regulator
  BLD42_RS07515 (BLD42_07515) kpsC 1435579..1437648 (-) 2070 WP_071311317.1 capsular polysaccharide biosynthesis protein -
  BLD42_RS07520 (BLD42_07520) cysC 1437645..1438157 (-) 513 WP_002875994.1 cytidine diphosphoramidate kinase -
  BLD42_RS07525 (BLD42_07525) - 1438147..1438908 (-) 762 WP_052796163.1 CTP:phosphoglutamine cytidylyltransferase -
  BLD42_RS07530 (BLD42_07530) - 1438910..1439512 (-) 603 WP_002885258.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46859.55 Da        Isoelectric Point: 9.9031

>NTDB_id=203295 BLD42_RS07510 WP_057031721.1 1434398..1435582(-) (kpsS) [Campylobacter jejuni strain TS1218]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYTSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=203295 BLD42_RS07510 WP_057031721.1 1434398..1435582(-) (kpsS) [Campylobacter jejuni strain TS1218]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATACTAGTGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T0HCR9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.477

100

0.985


Multiple sequence alignment