Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CJZ71_RS16930 Genome accession   NZ_CP022891
Coordinates   3202923..3204737 (+) Length   604 a.a.
NCBI ID   WP_014479193.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_NT_03     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3197923..3209737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ71_RS16915 (CJZ71_16915) glvR 3198740..3199504 (+) 765 WP_014479189.1 MurR/RpiR family transcriptional regulator GlvR -
  CJZ71_RS16920 (CJZ71_16920) malP 3199519..3201102 (+) 1584 WP_069837372.1 PTS maltose transporter subunit IIBC -
  CJZ71_RS16925 (CJZ71_16925) yfiB 3201208..3202929 (+) 1722 WP_017696472.1 ABC transporter ATP-binding protein -
  CJZ71_RS16930 (CJZ71_16930) rcrQ 3202923..3204737 (+) 1815 WP_014479193.1 ABC transporter ATP-binding protein Regulator
  CJZ71_RS16935 (CJZ71_16935) catD 3204891..3205295 (+) 405 WP_069837373.1 DoxX family oxidoreductase CatD -
  CJZ71_RS16940 (CJZ71_16940) catE 3205313..3206170 (+) 858 WP_069837374.1 catechol 2,3-dioxygenase -
  CJZ71_RS16945 (CJZ71_16945) lnrJ 3206289..3207491 (+) 1203 WP_033881373.1 two-component system sensor histidine kinase LnrJ -
  CJZ71_RS16950 (CJZ71_16950) lnrK 3207488..3208150 (+) 663 WP_014479199.1 two-component system response regulator LnrK -
  CJZ71_RS16955 (CJZ71_16955) lnrL 3208294..3209229 (+) 936 WP_014479200.1 linearmycin resistance ATP-binding protein LnrL -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67284.02 Da        Isoelectric Point: 9.6213

>NTDB_id=203015 CJZ71_RS16930 WP_014479193.1 3202923..3204737(+) (rcrQ) [Bacillus subtilis strain DKU_NT_03]
MLKDIRKPFQYPKLPIDKKEGAKKRAKAKDTKGTLRRIWSYLAERKGLLVLVMLMVVISAIFGLLGPFVIGKAIDHFIVG
KTVSGLIPVLLLLLAIYIIQSLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSST
LNTSVIQILSSVITFAGTIAVMLYMSPLLTLITLTIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIK
AYSREKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFAVLDEKEERDDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGP
TGAGKTTVTNLLARFYEPDEGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTAN
AHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHR
LNTIQRADQIVVLKDGEMIEKGSHDELIQQKGFYSDLYESQFEK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=203015 CJZ71_RS16930 WP_014479193.1 3202923..3204737(+) (rcrQ) [Bacillus subtilis strain DKU_NT_03]
ATGCTAAAAGACATCCGCAAGCCTTTCCAATATCCCAAACTGCCAATTGACAAAAAAGAAGGAGCGAAAAAGCGGGCGAA
AGCAAAGGATACAAAGGGCACACTGAGACGAATCTGGTCTTACTTGGCTGAACGAAAAGGACTGCTCGTACTTGTCATGC
TGATGGTTGTCATCAGCGCGATATTCGGGCTCCTTGGCCCCTTTGTGATCGGAAAGGCCATTGACCATTTTATCGTCGGG
AAAACGGTCAGCGGCTTGATTCCCGTTTTGCTTCTTCTGCTCGCTATCTATATCATTCAGTCCCTGTCGCTTTGGTTTCA
AAACTATTGGATGATTACGATCTCGCAGGGCACGGTTTTCAGAATGAGAAGCGAATTGTTCACCCATCTGCATGAGCTGC
CGATTCCATTTTTTGATAAACAGCGGCACGGCGAGCTGATGAGCCGGGTGACGAATGACATCGAAAATGTCAGTTCTACC
TTAAACACGTCAGTCATTCAAATTTTGTCAAGCGTGATCACCTTTGCCGGGACGATTGCGGTGATGCTGTACATGAGCCC
GCTCCTTACATTGATTACGCTGACCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGC
TGTTTAAAGAACAGCAGAAAAACCTAGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAA
GCATATTCACGTGAGAAGCAGATTACTGCTGAATTTCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCA
GACGATTTCCGGGTTTATCCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACAATGATTGCGGCAATCGGCGGTT
TGTTTGCGCTGAAAGGCTGGATCTCGATCGGCTCCATCGTCGTCTTTGCCGAGTATTCAAGACAATTTACACGCCCTTTA
AACGATCTGGCCAACCAGTTTAATACGATGCTGTCCGCAATTGCCGGCGCTGAACGGGTGTTTGCCGTGCTTGATGAAAA
AGAAGAGCGCGATGATGAAAAGAACGCCGTGCATCAGCCCATCCAAACAGGCAGCATTGAATTCAGGGATGTTTCCTTCG
GTTACGATAAAGGGCAGCAGACACTGAAGCATTTACAGTTCACCGTGCCTGCGGGGCAGTCCATCGCGTTTGTCGGACCG
ACGGGGGCGGGGAAGACAACCGTCACTAACCTTCTCGCCCGTTTTTACGAGCCTGACGAAGGAAAAATTTTAATCGACGG
TACAGATATTAAAACCCTTACTAGAGCAAGCCTGAGAAAAAACATGGGGTTTGTTCTTCAGGATTCTTTCTTATTTCAGG
GAACGATCAGAGAAAACATTCGCTACGGCAGGCTTGATGCTTCTGATCAGGAAGTCGAAGCCGCTGCAAAAACAGCGAAT
GCCCATAGTTTTATTGAAAGGCTGCCAAAAGGGTATGACACCGTGCTGACGCAAAACGGTTCGGGCATCAGTCAGGGACA
GAAGCAGTTGATTTCTATAGCGAGGGCGGTGCTTGCCGATCCGGTTCTTCTCATTTTGGATGAAGCGACAAGCAACATTG
ATACCGTTACAGAAGTCAACATTCAAGAAGCGCTTGCCCGTTTAATGGAAGGAAGAACAAGCGTCATCATTGCCCACAGG
CTGAACACCATTCAAAGAGCGGACCAGATTGTGGTGCTAAAAGACGGTGAAATGATTGAAAAAGGCAGCCATGACGAGCT
GATTCAGCAAAAAGGATTTTACAGTGACTTATATGAAAGCCAATTTGAGAAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(50-320)

ABC transporter (ABC_tran)

(382-531)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.483

96.026

0.379