Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | BKP58_RS06065 | Genome accession | NZ_CP017763 |
| Coordinates | 1085889..1086842 (-) | Length | 317 a.a. |
| NCBI ID | WP_014479436.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain 29R7-12 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1080889..1091842
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKP58_RS06035 (BKP58_06075) | appD | 1081020..1082006 (-) | 987 | WP_003232965.1 | oligopeptide ABC transporter ATP-binding protein AppD | - |
| BKP58_RS06040 (BKP58_06080) | yjaZ | 1082198..1082983 (-) | 786 | WP_014479439.1 | DUF2268 domain-containing protein | - |
| BKP58_RS06045 (BKP58_06085) | fabF | 1083059..1084300 (-) | 1242 | WP_014479438.1 | beta-ketoacyl-ACP synthase II | - |
| BKP58_RS06050 (BKP58_06090) | fabH | 1084323..1085261 (-) | 939 | WP_003232971.1 | beta-ketoacyl-ACP synthase III | - |
| BKP58_RS06055 (BKP58_06095) | yjzB | 1085426..1085653 (+) | 228 | WP_031600361.1 | spore coat protein YjzB | - |
| BKP58_RS06060 (BKP58_06100) | comZ | 1085683..1085874 (-) | 192 | WP_003224559.1 | ComG operon transcriptional repressor ComZ | Regulator |
| BKP58_RS06065 (BKP58_06105) | med | 1085889..1086842 (-) | 954 | WP_014479436.1 | transcriptional regulator Med | Regulator |
| BKP58_RS06070 (BKP58_06110) | - | 1086933..1087490 (-) | 558 | WP_014479435.1 | hypothetical protein | - |
| BKP58_RS06075 (BKP58_06115) | - | 1087572..1088306 (-) | 735 | WP_014479433.1 | hypothetical protein | - |
| BKP58_RS06080 (BKP58_06120) | yjzD | 1088555..1088740 (+) | 186 | WP_003245236.1 | YjzD family protein | - |
| BKP58_RS06085 (BKP58_06125) | yjzC | 1088786..1088965 (-) | 180 | WP_003245356.1 | YjzC family protein | - |
| BKP58_RS06095 (BKP58_06135) | - | 1089143..1090293 (+) | 1151 | WP_087614160.1 | IS3 family transposase | - |
| BKP58_RS06100 (BKP58_06140) | argF | 1090341..1091300 (-) | 960 | WP_014479432.1 | ornithine carbamoyltransferase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35310.88 Da Isoelectric Point: 4.6652
>NTDB_id=202653 BKP58_RS06065 WP_014479436.1 1085889..1086842(-) (med) [Bacillus subtilis strain 29R7-12]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
Nucleotide
Download Length: 954 bp
>NTDB_id=202653 BKP58_RS06065 WP_014479436.1 1085889..1086842(-) (med) [Bacillus subtilis strain 29R7-12]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
99.369 |
100 |
0.994 |