Detailed information NTG0202605

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: BKP57_RS01415
• Genome accession: NZ_CP017762
• Coordinates: 283520..285847 (-)
• Length: 775 a.a.
• NCBI ID: WP_072740896.1
• Uniprot ID: -
• Organism: Virgibacillus sp. 6R
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 278520..290847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKP57_RS01395 (BKP57_01380)	-	278636..278905 (-)	270	WP_050353158.1	IreB family regulatory phosphoprotein	-
BKP57_RS01400 (BKP57_01385)	alaS	279025..281667 (-)	2643	WP_050353159.1	alanine--tRNA ligase	-
BKP57_RS01405 (BKP57_01390)	-	282101..283207 (-)	1107	WP_050353160.1	AI-2E family transporter	-
BKP57_RS01410 (BKP57_01395)	-	283246..283440 (-)	195	WP_170875266.1	hypothetical protein	-
BKP57_RS01415 (BKP57_01400)	recD2	283520..285847 (-)	2328	WP_072740896.1	ATP-dependent RecD-like DNA helicase	Machinery gene
BKP57_RS01420 (BKP57_01405)	-	285869..286537 (-)	669	WP_072740897.1	tetratricopeptide repeat protein	-
BKP57_RS01425 (BKP57_01410)	mnmA	286552..287664 (-)	1113	WP_128743574.1	tRNA 2-thiouridine(34) synthase MnmA	-
BKP57_RS01430 (BKP57_01415)	-	288001..289146 (-)	1146	WP_050353164.1	cysteine desulfurase family protein	-
BKP57_RS01435 (BKP57_01420)	-	289169..289588 (-)	420	WP_050353165.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 775 a.a.
• Molecular weight: 88360.02 Da
• Isoelectric Point: 5.1063

>NTDB_id=202605 BKP57_RS01415 WP_072740896.1 283520..285847(-) (recD2) [Virgibacillus sp. 6R]
MEQIKQMAEHESYIRGELLHLIFQNEAEHFSIAKIKVLDTNEAFEDKTIVIKGYFFNLQPETSYYFYGIFDKHPRFGTQY
KVTSYKTFIPDTKEGLIAYLSSDLFYGIGKKTATKIVQQLGENAISKIIDDPEALYTVPGIKEKAADQLRATIQENQGFE
HVAVYLAQYNIGLKMAQKIYQHYKDEAIQLLEADPYQFVFDIEGFGFRTADEIARQMGLPATHPTRVGAGCIYVLQSSVQ
DGHVYLPMDFCITSICALLNTEELTESMIIDKLKALNKDKKVIVQDGNVYLPSLYYAEDGFSSQLKRILQKPIEHQTPMA
ELMKIIGDIEEEEILSYGKEQFTAINQAIHAKVMILTGGPGTGKTTVIKGILKAYATIHELALRPEDYNHKDDFPFILTA
PTGRAAKRLNESTGLPAMTVHRLLGWDGNQSFEKNEHEPLSGKFIIIDEFSMVDIWLANHLFKAIPDDMQVLIVGDEDQL
PSVGPGQVLSDLLSTDRIPYVRLTEVYRQKEGSKIIQLAHEIKKDEPVNLQKDHDFNFIHCNEIQMVDVITKIFKKAVEK
GIEPKDIQVLAPMYRSEAGITKLNQELQKVINPKTEQKREVRTAEAIFRTGDKVIQLVNQPEDGVYNGDIGEVVAIFREE
ENIEQEEQLVIAFEDREVVYERKDYRNIMLAYCISIHKSQGSEFPIVIMPVVRAYQRMLRKNLLYTAITRSKQSLIICGD
QESFLYGVATKHKNQRYTTLTQHLVEKLGEEQDQDGQNSTVLEIEDANLSPYDFM

Nucleotide

• Length: 2328 bp

>NTDB_id=202605 BKP57_RS01415 WP_072740896.1 283520..285847(-) (recD2) [Virgibacillus sp. 6R]
ATGGAACAAATAAAACAAATGGCTGAGCATGAAAGCTATATTCGAGGCGAACTCCTTCATTTGATTTTTCAAAATGAGGC
GGAGCATTTTTCGATTGCCAAAATTAAAGTGTTGGATACAAACGAAGCCTTTGAGGATAAAACGATTGTAATTAAGGGTT
ATTTTTTTAATCTGCAGCCGGAAACAAGCTATTATTTCTATGGCATATTTGACAAGCATCCACGATTTGGCACTCAATAT
AAAGTGACTTCTTACAAAACATTTATTCCTGATACGAAAGAAGGATTAATTGCTTATTTATCCAGTGATCTATTTTATGG
TATTGGCAAAAAAACAGCTACCAAAATTGTTCAGCAACTAGGTGAAAATGCAATTTCAAAAATTATTGATGATCCAGAAG
CTTTATATACTGTTCCAGGGATAAAAGAGAAAGCGGCGGATCAATTACGCGCTACTATACAAGAAAATCAAGGGTTTGAA
CATGTTGCTGTTTATTTAGCTCAATATAATATTGGTTTAAAAATGGCTCAAAAGATCTATCAACATTATAAAGATGAAGC
TATTCAGTTATTAGAAGCAGATCCGTACCAATTTGTGTTTGATATTGAAGGGTTTGGTTTTCGGACTGCTGATGAAATTG
CTAGACAAATGGGTTTGCCGGCTACACATCCTACTCGAGTGGGAGCAGGTTGTATCTATGTACTGCAAAGTTCTGTTCAA
GATGGTCATGTTTATTTACCTATGGATTTTTGTATTACATCTATTTGTGCGCTTTTAAATACAGAAGAATTAACAGAGTC
AATGATTATTGATAAATTAAAAGCTTTAAATAAAGATAAAAAAGTAATTGTCCAAGATGGAAATGTTTATTTACCATCGC
TTTACTATGCTGAGGATGGGTTTAGTTCGCAGTTAAAGCGGATTTTACAAAAGCCGATCGAGCACCAAACTCCCATGGCT
GAACTTATGAAGATTATAGGTGATATTGAAGAGGAAGAAATATTATCCTATGGTAAAGAGCAATTCACTGCAATTAACCA
AGCCATCCATGCAAAAGTCATGATTCTTACAGGTGGACCAGGAACAGGAAAAACAACGGTTATTAAAGGCATTCTAAAGG
CATACGCCACAATCCATGAATTAGCGCTTCGTCCAGAGGATTACAATCATAAAGATGACTTTCCATTTATTCTAACTGCA
CCAACTGGTAGAGCTGCGAAGCGATTAAATGAATCGACAGGGCTTCCCGCAATGACGGTCCACCGATTATTGGGATGGGA
TGGAAATCAAAGCTTTGAAAAGAATGAACATGAGCCACTTAGTGGGAAGTTTATTATTATTGATGAATTTTCAATGGTAG
ATATTTGGTTAGCTAACCACCTGTTTAAAGCTATTCCTGATGACATGCAAGTGCTGATTGTTGGCGATGAGGATCAATTG
CCGTCTGTCGGTCCTGGTCAGGTCTTATCTGATTTATTAAGTACTGATCGGATTCCTTACGTTCGGCTGACAGAAGTATA
TCGGCAAAAAGAAGGCTCGAAAATTATTCAACTTGCACATGAAATAAAAAAGGATGAACCAGTGAATTTACAAAAGGATC
ATGATTTTAATTTCATTCATTGTAACGAGATACAAATGGTTGATGTGATTACTAAAATATTTAAAAAAGCAGTGGAGAAG
GGGATTGAGCCAAAGGATATTCAAGTTCTTGCACCAATGTATCGTTCGGAAGCGGGGATTACAAAACTCAATCAAGAGCT
CCAAAAAGTAATTAATCCAAAAACAGAACAAAAAAGAGAAGTTAGGACTGCTGAAGCTATCTTTCGAACCGGTGACAAGG
TAATTCAGCTTGTCAATCAGCCTGAAGATGGCGTTTATAATGGAGATATTGGAGAAGTTGTAGCTATTTTTCGTGAGGAA
GAGAATATCGAACAAGAAGAACAACTTGTCATTGCTTTCGAAGACCGTGAAGTAGTTTATGAACGGAAAGATTATCGTAA
TATTATGCTTGCATATTGTATTTCCATTCATAAATCGCAAGGAAGCGAATTTCCGATTGTCATTATGCCAGTTGTTCGAG
CATATCAACGAATGCTAAGGAAAAACTTATTATATACAGCTATAACTAGAAGTAAGCAATCGTTGATTATCTGCGGTGAT
CAAGAATCATTTTTGTACGGTGTTGCTACAAAGCATAAAAATCAGCGGTATACAACATTGACGCAGCACTTAGTTGAAAA
GCTGGGTGAAGAACAGGACCAGGACGGACAAAATTCAACCGTTCTTGAAATCGAGGACGCTAATCTTTCGCCGTATGATT
TTATGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix domain (HHH_5) (107-151)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (671-718)

• AAA domain (AAA_30) (337-542)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (583-653)

• Helix-hairpin-helix containing domain (HHH_RecD2) (155-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	47.449	100	0.48