Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   CG712_RS04275 Genome accession   NZ_CP022547
Coordinates   822037..822780 (-) Length   247 a.a.
NCBI ID   WP_011226469.1    Uniprot ID   Q5M2Y9
Organism   Streptococcus thermophilus strain B59671     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 817037..827780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG712_RS04245 (CG712_04280) - 817308..818252 (-) 945 WP_096811628.1 TIGR01212 family radical SAM protein -
  CG712_RS04250 (CG712_04285) sepM 818337..819413 (-) 1077 WP_022096499.1 SepM family pheromone-processing serine protease Regulator
  CG712_RS04255 (CG712_04290) coaD 819391..819888 (-) 498 WP_011226465.1 pantetheine-phosphate adenylyltransferase -
  CG712_RS04260 (CG712_04295) rsmD 819922..820461 (-) 540 WP_002951741.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  CG712_RS04265 (CG712_04300) trxB 820612..821532 (-) 921 WP_011226467.1 thioredoxin-disulfide reductase -
  CG712_RS04270 (CG712_04305) - 821598..821822 (-) 225 WP_011226468.1 DUF4059 family protein -
  CG712_RS04275 (CG712_04310) amiE 822037..822780 (-) 744 WP_011226469.1 amino acid ABC transporter ATP-binding protein Regulator
  CG712_RS04280 (CG712_04315) - 822780..823703 (-) 924 WP_232510049.1 amino acid ABC transporter permease -
  CG712_RS04285 (CG712_04320) - 823914..824744 (-) 831 WP_041828322.1 transporter substrate-binding domain-containing protein -
  CG712_RS04290 (CG712_04325) - 825214..825447 (-) 234 WP_002947030.1 hypothetical protein -
  CG712_RS04295 (CG712_04330) dinB 825745..826848 (-) 1104 WP_096811629.1 DNA polymerase IV -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27763.89 Da        Isoelectric Point: 5.4718

>NTDB_id=201613 CG712_RS04275 WP_011226469.1 822037..822780(-) (amiE) [Streptococcus thermophilus strain B59671]
MISIKNLTKEFSGQKVLDGIDIDIEKGEVVALVGASGAGKSTILRCLNYLEQPDSGTIAIDDFKVDFETITKEQILTLRR
KLAMVFQQFNLFERRTALDNVKEGLKIVKKLSDDEATKIAKEELTKVGLSNRENYYPRHLSGGQKQRVALARALAMRPDV
LLLDEPTSALDPELVGEVEKSIVDAAKSGQTMILVSHDMNFIYQVADKVLFLEKGHILEQGTPDEIFNHPKEERTKEFFA
SYSKQYL

Nucleotide


Download         Length: 744 bp        

>NTDB_id=201613 CG712_RS04275 WP_011226469.1 822037..822780(-) (amiE) [Streptococcus thermophilus strain B59671]
ATGATTAGTATCAAAAATTTGACCAAGGAATTTTCAGGACAAAAGGTTCTCGATGGCATTGATATTGACATTGAAAAAGG
TGAAGTTGTGGCTCTTGTTGGTGCCTCTGGTGCAGGGAAGTCGACTATCCTTCGTTGCTTGAACTATTTGGAACAACCTG
ATTCTGGTACTATTGCCATTGATGATTTCAAGGTGGATTTTGAAACAATTACCAAGGAGCAAATCCTTACTCTTCGTCGT
AAGTTGGCCATGGTGTTCCAACAGTTCAACCTCTTTGAACGTCGTACAGCCTTGGATAATGTTAAGGAAGGTCTCAAGAT
TGTTAAGAAACTTTCTGACGACGAAGCTACCAAGATTGCTAAAGAAGAGCTCACTAAGGTTGGGCTTTCTAATCGTGAAA
ATTACTACCCACGTCACTTGTCGGGTGGTCAAAAGCAACGTGTGGCTTTGGCTCGTGCCCTTGCAATGAGGCCTGATGTG
CTCTTGCTTGACGAACCAACATCTGCCCTTGACCCTGAGTTGGTTGGTGAGGTTGAAAAATCAATCGTAGATGCGGCTAA
ATCAGGTCAAACCATGATTTTGGTCAGTCACGACATGAACTTTATTTATCAAGTGGCTGACAAGGTGCTTTTCCTTGAAA
AAGGTCATATCCTTGAACAAGGAACACCTGATGAAATCTTTAACCATCCAAAAGAAGAGCGAACAAAAGAATTCTTCGCT
TCTTATTCAAAACAATATCTTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M2Y9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

33.962

100

0.364

Multiple sequence alignment