Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CG712_RS00380 Genome accession   NZ_CP022547
Coordinates   65912..67660 (+) Length   582 a.a.
NCBI ID   WP_059257332.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain B59671     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 60912..72660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG712_RS00360 (CG712_00360) glyA 61303..62553 (+) 1251 WP_096811377.1 serine hydroxymethyltransferase -
  CG712_RS00365 (CG712_00365) - 62560..63537 (+) 978 WP_014608183.1 nucleoid-associated protein -
  CG712_RS00370 (CG712_00370) - 63539..64150 (+) 612 WP_096811378.1 lysozyme family protein -
  CG712_RS00375 (CG712_00375) - 64183..65922 (+) 1740 WP_096811379.1 ABC transporter ATP-binding protein -
  CG712_RS00380 (CG712_00380) rcrQ 65912..67660 (+) 1749 WP_059257332.1 ABC transporter ATP-binding protein Regulator
  CG712_RS00385 (CG712_00385) - 67836..67967 (+) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  CG712_RS00390 (CG712_00390) dltA 67976..69526 (+) 1551 WP_096811380.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  CG712_RS00395 (CG712_00395) dltB 69523..70770 (+) 1248 WP_002950436.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  CG712_RS00400 (CG712_00400) dltC 70788..71027 (+) 240 WP_002950439.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  CG712_RS00405 (CG712_00405) dltD 71020..72288 (+) 1269 WP_022096818.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65897.54 Da        Isoelectric Point: 9.2071

>NTDB_id=201578 CG712_RS00380 WP_059257332.1 65912..67660(+) (rcrQ) [Streptococcus thermophilus strain B59671]
MKARNNKSTLKRLCKDILSQRYLFALATVGTIVQVALTVYFPILLGDAVDAVLKMNAVFLMSRLIWQMLLLILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAIPFSYLDRQGTGDMVSRVTTDSDQLNNGLLMFFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVTRFIARKSYQLYRNQTKWRGKQTQLIEESLTQEALIQILNAQDQMVRNFNEVNGKYANYSQG
AIFYSSAVNPATRFFNSLLYALITGVGAYRIMSGGTFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEDEIPETGNAVLDEAEVQGHFQFDHVQFGYLQNKPLIKDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGQIL
LDGRDITYYTRESLRKQIGMVLQETWLKVATIHDNIAYGNPKASREEVVAAAKAANADFFIKQLPLGYDTFLRDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
NQLMRTKGMYYRMQTAQKTQNN

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=201578 CG712_RS00380 WP_059257332.1 65912..67660(+) (rcrQ) [Streptococcus thermophilus strain B59671]
ATGAAGGCTAGAAATAACAAGTCAACGCTTAAACGATTATGTAAAGATATCCTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTGTTCAAGTTGCTTTGACTGTTTACTTCCCTATTTTGCTTGGCGATGCAGTAGATGCTGTTCTTA
AGATGAATGCTGTCTTTTTGATGTCACGTTTGATTTGGCAGATGCTTTTGCTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGATTGATTTATTCTTATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATTCATGC
TATTCCATTCAGTTATCTTGATCGTCAAGGAACTGGAGACATGGTTAGCCGCGTGACTACAGATAGTGACCAATTGAATA
ATGGTCTCCTTATGTTCTTTAATCAATTTTTCGTTGGGCTTTTGACCATCTTTGTCATAATCATTACCATGGCTCGCTTA
GACTGGTTCATGATGCTCTTAGTTCTAGTGATGACACCTTTATCAATGCTTGTGACTCGTTTCATTGCTAGGAAGAGTTA
TCAACTCTATCGCAATCAAACCAAGTGGAGAGGCAAACAGACTCAGCTGATCGAAGAAAGTCTAACTCAGGAAGCTCTGA
TACAAATTCTAAATGCTCAAGACCAGATGGTTCGCAATTTTAATGAGGTTAATGGTAAGTATGCTAACTATTCACAGGGA
GCCATCTTTTACTCGTCAGCGGTTAACCCAGCTACACGTTTTTTTAATAGCTTGCTTTACGCTCTCATTACAGGTGTTGG
TGCCTATCGCATCATGTCGGGAGGCACATTTACAGTGGGACAATTGACTACCTTCCTAAACTATGTCACTCAGTATACCA
AACCTTTTAATGACATTTCATCTGTCCTATCTGAACTTCAAAGTGCTTTAGCCTGTGCTGATCGTCTATATATGATTTTA
GATGAAGATGAAATACCAGAAACGGGAAATGCGGTTTTGGACGAAGCAGAAGTTCAGGGACATTTTCAATTTGATCATGT
TCAATTTGGCTATTTGCAAAATAAACCTCTTATCAAGGATTTGAGTATTGATATTCCTGCTGCGAGTACCGTTGCTATTG
TTGGCCCAACAGGAGCAGGAAAATCTACTTTGATTAATCTTCTCATGCGTTTTTATGATTTGGATAAGGGTCAAATTTTG
CTAGACGGTCGAGATATTACGTATTATACCCGTGAGAGTCTTCGCAAGCAGATTGGGATGGTTCTACAAGAAACTTGGCT
TAAAGTAGCTACTATCCATGATAATATTGCCTATGGCAATCCAAAAGCTAGTCGAGAGGAAGTAGTTGCAGCAGCCAAAG
CAGCTAATGCTGATTTCTTTATTAAACAATTACCTCTAGGCTATGACACTTTCTTGAGAGATGCAGGGCAATCTCTTTCA
CAAGGTCAACGTCAGTTACTAACTATTGCTCGTATATTTGTCAATGTTCCTAAAATTCTTATTTTGGATGAAGCAACATC
AAGTATTGATACCCGTACGGAGCTCCTTATTCAAGAAGCTTTTGCTAAACTGATGAAAGGTCGGACGAGTTTCATTATTG
CTCATAGATTATCTACCATTGAGAATGCAGACCTTATTTTGGTAATGAATAATGGTGATATCGTTGAACATGGAACACAT
AATCAATTAATGAGGACTAAGGGAATGTACTATCGTATGCAGACAGCCCAAAAAACACAAAATAATTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.285

100

0.373

Multiple sequence alignment