Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | KAB08_RS17435 | Genome accession | NZ_CP017656 |
| Coordinates | 3635363..3635788 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain KAB08 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3630363..3640788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAB08_RS17405 (KAB08_03520) | - | 3630891..3631925 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| KAB08_RS17410 (KAB08_03521) | - | 3632040..3632981 (+) | 942 | WP_151276089.1 | lipase family alpha/beta hydrolase | - |
| KAB08_RS17415 (KAB08_03522) | rplS | 3633034..3633402 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| KAB08_RS17420 (KAB08_03523) | trmD | 3633611..3634351 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| KAB08_RS17425 (KAB08_03524) | rimM | 3634397..3634945 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| KAB08_RS17430 (KAB08_03525) | rpsP | 3634965..3635216 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| KAB08_RS17435 (KAB08_03526) | pilE | 3635363..3635788 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| KAB08_RS17440 (KAB08_03527) | pilY2 | 3635785..3636267 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| KAB08_RS17445 (KAB08_03528) | pilY1 | 3636280..3640134 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=201197 KAB08_RS17435 WP_000788342.1 3635363..3635788(-) (pilE) [Acinetobacter baumannii strain KAB08]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=201197 KAB08_RS17435 WP_000788342.1 3635363..3635788(-) (pilE) [Acinetobacter baumannii strain KAB08]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |