Detailed information NTG0201188

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KAB08_RS08435
• Genome accession: NZ_CP017656
• Coordinates: 1769469..1770170 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain KAB08
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1764469..1775170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAB08_RS08400 (KAB08_01697)	kdsB	1764992..1765753 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KAB08_RS08405 (KAB08_01698)	-	1765765..1766745 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
KAB08_RS08410 (KAB08_01699)	-	1766757..1767098 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
KAB08_RS08415 (KAB08_01700)	-	1767116..1767889 (+)	774	WP_000497298.1	TatD family hydrolase	-
KAB08_RS08420 (KAB08_01701)	-	1767927..1768535 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
KAB08_RS08425 (KAB08_01702)	-	1768545..1769099 (+)	555	WP_000841373.1	type II secretion system protein	-
KAB08_RS08430 (KAB08_01703)	xcpV	1769089..1769469 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
KAB08_RS08435 (KAB08_01704)	xcpW	1769469..1770170 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KAB08_RS08440 (KAB08_01705)	gspK	1770170..1771129 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
KAB08_RS08445 (KAB08_01706)	-	1771360..1771956 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
KAB08_RS08450 (KAB08_01707)	ung	1772007..1772720 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
KAB08_RS08455 (KAB08_01708)	-	1772717..1773841 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
KAB08_RS08460 (KAB08_01709)	tadA	1773848..1774351 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
KAB08_RS08465 (KAB08_01710)	-	1774421..1774864 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=201188 KAB08_RS08435 WP_000594589.1 1769469..1770170(+) (xcpW) [Acinetobacter baumannii strain KAB08]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=201188 KAB08_RS08435 WP_000594589.1 1769469..1770170(+) (xcpW) [Acinetobacter baumannii strain KAB08]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996