Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | KAB02_RS17650 | Genome accession | NZ_CP017644 |
| Coordinates | 3665632..3666057 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain KAB02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3660632..3671057
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAB02_RS17620 (KAB02_03557) | - | 3661160..3662194 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| KAB02_RS17625 (KAB02_03558) | - | 3662309..3663250 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| KAB02_RS17630 (KAB02_03559) | rplS | 3663303..3663671 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| KAB02_RS17635 (KAB02_03560) | trmD | 3663880..3664620 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| KAB02_RS17640 (KAB02_03561) | rimM | 3664666..3665214 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| KAB02_RS17645 (KAB02_03562) | rpsP | 3665234..3665485 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| KAB02_RS17650 (KAB02_03563) | pilE | 3665632..3666057 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| KAB02_RS17655 (KAB02_03564) | pilY2 | 3666054..3666536 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| KAB02_RS17660 (KAB02_03565) | pilY1 | 3666549..3670403 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=200968 KAB02_RS17650 WP_000788342.1 3665632..3666057(-) (pilE) [Acinetobacter baumannii strain KAB02]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=200968 KAB02_RS17650 WP_000788342.1 3665632..3666057(-) (pilE) [Acinetobacter baumannii strain KAB02]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |