Detailed information
Bioinformatically predicted
Overview
| Name | pilM | Type | Machinery gene |
| Locus tag | BJP34_RS10970 | Genome accession | NZ_CP017599 |
| Coordinates | 2888144..2889247 (+) | Length | 367 a.a. |
| NCBI ID | WP_070392375.1 | Uniprot ID | - |
| Organism | Moorena producens PAL-8-15-08-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2883144..2894247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJP34_RS39300 | - | 2883496..2883624 (-) | 129 | WP_324611047.1 | hypothetical protein | - |
| BJP34_RS10950 (BJP34_10950) | - | 2883639..2884040 (-) | 402 | WP_070392374.1 | hypothetical protein | - |
| BJP34_RS47270 | - | 2884479..2884772 (+) | 294 | WP_229424318.1 | helix-turn-helix domain-containing protein | - |
| BJP34_RS10955 (BJP34_10955) | - | 2884822..2885847 (+) | 1026 | WP_229424455.1 | RNA-guided endonuclease InsQ/TnpB family protein | - |
| BJP34_RS10960 (BJP34_10960) | bchM | 2885886..2886572 (-) | 687 | WP_070396612.1 | magnesium protoporphyrin IX methyltransferase | - |
| BJP34_RS10965 (BJP34_10965) | - | 2886642..2887940 (+) | 1299 | WP_070396613.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| BJP34_RS10970 (BJP34_10970) | pilM | 2888144..2889247 (+) | 1104 | WP_070392375.1 | type IV pilus assembly protein PilM | Machinery gene |
| BJP34_RS10975 (BJP34_10975) | - | 2889252..2890052 (+) | 801 | WP_070392376.1 | PilN domain-containing protein | - |
| BJP34_RS10980 (BJP34_10980) | - | 2890049..2890798 (+) | 750 | WP_070392377.1 | GspMb/PilO family protein | - |
| BJP34_RS10985 (BJP34_10985) | - | 2891097..2893523 (+) | 2427 | WP_070392378.1 | AMIN domain-containing protein | - |
Sequence
Protein
Download Length: 367 a.a. Molecular weight: 40642.56 Da Isoelectric Point: 4.2959
>NTDB_id=200606 BJP34_RS10970 WP_070392375.1 2888144..2889247(+) (pilM) [Moorena producens PAL-8-15-08-1]
MVNHLKNLFSRRKQGVGIELAPERIHIAQLQRQGQSLKATTLYSHEVPEGIWEGGQIVDSPGLAELIREALQESQVKVER
VATALPMREAVIRIIPIPAELDDNELRDMVLNHEAGLYLPYPREEVDLDYQKLGFFVDEDGIEKVQVLLVATRKEITDSY
LDTFEQVGLQVDVLEINSFALIRTIREQLRQFPSQEAAVLVDIEFDSTEIAIIVDGVPQFSRTVPIGTYQLQSALSRAMN
LPASRNTELLQGMTIPSTPVDGMRTGSTGVNPGMVALIQVLGEIADELRRSIDFYLNQMDNLEVAQLLLAGPGGGIGQLD
EFFTQRLSLPTIQVDPVAALSLEVEKDIPMVERPSLGTVLGLGLREV
MVNHLKNLFSRRKQGVGIELAPERIHIAQLQRQGQSLKATTLYSHEVPEGIWEGGQIVDSPGLAELIREALQESQVKVER
VATALPMREAVIRIIPIPAELDDNELRDMVLNHEAGLYLPYPREEVDLDYQKLGFFVDEDGIEKVQVLLVATRKEITDSY
LDTFEQVGLQVDVLEINSFALIRTIREQLRQFPSQEAAVLVDIEFDSTEIAIIVDGVPQFSRTVPIGTYQLQSALSRAMN
LPASRNTELLQGMTIPSTPVDGMRTGSTGVNPGMVALIQVLGEIADELRRSIDFYLNQMDNLEVAQLLLAGPGGGIGQLD
EFFTQRLSLPTIQVDPVAALSLEVEKDIPMVERPSLGTVLGLGLREV
Nucleotide
Download Length: 1104 bp
>NTDB_id=200606 BJP34_RS10970 WP_070392375.1 2888144..2889247(+) (pilM) [Moorena producens PAL-8-15-08-1]
ATGGTTAACCATCTTAAAAATTTATTTTCCCGCCGCAAGCAAGGTGTTGGTATAGAATTAGCCCCAGAACGAATTCATAT
TGCTCAATTGCAGCGGCAAGGTCAGAGCCTAAAAGCTACAACCCTATATTCTCATGAGGTTCCAGAAGGGATCTGGGAAG
GAGGACAAATTGTTGATTCCCCTGGTTTAGCGGAACTGATTCGAGAAGCCCTACAGGAGAGTCAAGTGAAAGTGGAGCGG
GTTGCCACTGCTTTACCAATGCGAGAAGCAGTAATCCGGATTATTCCGATTCCTGCTGAGCTAGATGATAACGAGCTTCG
GGATATGGTACTAAACCATGAAGCTGGCTTATATTTGCCCTATCCCCGGGAAGAAGTGGATTTGGATTATCAGAAGCTTG
GCTTCTTTGTGGATGAAGATGGAATCGAAAAGGTGCAAGTCCTGCTGGTGGCTACTCGCAAAGAAATCACCGATAGCTAT
CTCGATACCTTTGAGCAGGTAGGTTTACAAGTAGATGTACTCGAAATTAATAGCTTTGCCCTGATTCGGACCATCCGAGA
ACAACTGCGTCAATTTCCTTCCCAAGAGGCAGCCGTTCTGGTAGATATTGAATTTGATAGTACTGAAATTGCCATTATTG
TAGATGGTGTCCCGCAGTTTTCCCGTACTGTTCCCATTGGTACCTACCAACTTCAGAGCGCTCTATCACGGGCGATGAAT
TTACCAGCCTCTAGAAACACTGAACTGCTCCAGGGGATGACTATTCCCAGTACCCCAGTTGATGGCATGCGCACCGGCTC
GACCGGGGTAAATCCAGGTATGGTAGCTCTGATCCAAGTCTTGGGAGAAATTGCTGATGAACTACGGCGCTCTATCGATT
TTTACCTCAATCAGATGGACAATCTAGAAGTAGCCCAACTCCTACTAGCTGGTCCTGGGGGTGGTATCGGACAACTTGAT
GAATTTTTTACCCAACGGTTAAGCTTGCCCACGATTCAGGTGGATCCGGTGGCGGCTCTTTCCCTAGAAGTGGAGAAAGA
TATTCCGATGGTAGAACGACCGAGCTTAGGAACTGTGCTTGGATTAGGATTACGAGAGGTATAG
ATGGTTAACCATCTTAAAAATTTATTTTCCCGCCGCAAGCAAGGTGTTGGTATAGAATTAGCCCCAGAACGAATTCATAT
TGCTCAATTGCAGCGGCAAGGTCAGAGCCTAAAAGCTACAACCCTATATTCTCATGAGGTTCCAGAAGGGATCTGGGAAG
GAGGACAAATTGTTGATTCCCCTGGTTTAGCGGAACTGATTCGAGAAGCCCTACAGGAGAGTCAAGTGAAAGTGGAGCGG
GTTGCCACTGCTTTACCAATGCGAGAAGCAGTAATCCGGATTATTCCGATTCCTGCTGAGCTAGATGATAACGAGCTTCG
GGATATGGTACTAAACCATGAAGCTGGCTTATATTTGCCCTATCCCCGGGAAGAAGTGGATTTGGATTATCAGAAGCTTG
GCTTCTTTGTGGATGAAGATGGAATCGAAAAGGTGCAAGTCCTGCTGGTGGCTACTCGCAAAGAAATCACCGATAGCTAT
CTCGATACCTTTGAGCAGGTAGGTTTACAAGTAGATGTACTCGAAATTAATAGCTTTGCCCTGATTCGGACCATCCGAGA
ACAACTGCGTCAATTTCCTTCCCAAGAGGCAGCCGTTCTGGTAGATATTGAATTTGATAGTACTGAAATTGCCATTATTG
TAGATGGTGTCCCGCAGTTTTCCCGTACTGTTCCCATTGGTACCTACCAACTTCAGAGCGCTCTATCACGGGCGATGAAT
TTACCAGCCTCTAGAAACACTGAACTGCTCCAGGGGATGACTATTCCCAGTACCCCAGTTGATGGCATGCGCACCGGCTC
GACCGGGGTAAATCCAGGTATGGTAGCTCTGATCCAAGTCTTGGGAGAAATTGCTGATGAACTACGGCGCTCTATCGATT
TTTACCTCAATCAGATGGACAATCTAGAAGTAGCCCAACTCCTACTAGCTGGTCCTGGGGGTGGTATCGGACAACTTGAT
GAATTTTTTACCCAACGGTTAAGCTTGCCCACGATTCAGGTGGATCCGGTGGCGGCTCTTTCCCTAGAAGTGGAGAAAGA
TATTCCGATGGTAGAACGACCGAGCTTAGGAACTGTGCTTGGATTAGGATTACGAGAGGTATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilM | Synechocystis sp. PCC 6803 |
71.311 |
99.728 |
0.711 |