Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG596_RS11610 | Genome accession | NZ_CP017533 |
| Coordinates | 2271295..2271633 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 1506 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2266295..2276633
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG596_RS11585 (BG596_11415) | rpsL | 2266534..2266908 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| BG596_RS11590 (BG596_11420) | rfaC | 2267029..2267988 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG596_RS11595 (BG596_11425) | waaF | 2268055..2269092 (-) | 1038 | WP_006250331.1 | lipopolysaccharide heptosyltransferase II | - |
| BG596_RS11600 (BG596_11430) | - | 2269203..2269619 (-) | 417 | WP_006250330.1 | MliC family protein | - |
| BG596_RS11605 (BG596_11435) | - | 2269683..2271002 (-) | 1320 | WP_006253337.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG596_RS11610 (BG596_11440) | comEA/comE1 | 2271295..2271633 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG596_RS11615 (BG596_11445) | asd | 2271798..2272691 (+) | 894 | WP_006250004.1 | archaetidylserine decarboxylase | - |
| BG596_RS11620 (BG596_11450) | hsdR | 2272763..2275114 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG596_RS11625 (BG596_11455) | - | 2275162..2276631 (+) | 1470 | WP_006250002.1 | HsdM family class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=199876 BG596_RS11610 WP_006251644.1 2271295..2271633(+) (comEA/comE1) [Mannheimia haemolytica strain 1506]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=199876 BG596_RS11610 WP_006251644.1 2271295..2271633(+) (comEA/comE1) [Mannheimia haemolytica strain 1506]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |