Detailed information NTG0198490

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: S101392_RS14190
• Genome accession: NZ_CP021921
• Coordinates: 2734305..2735570 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM101392
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2729305..2740570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101392_RS14170 (S101392_02818)	yrrB	2730676..2731296 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
S101392_RS14175 (S101392_02819)	mnmA	2731382..2732497 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
S101392_RS14180 (S101392_02820)	iscSA	2732525..2733667 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
S101392_RS14185 (S101392_02821)	cymR	2733686..2734102 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
S101392_RS14190 (S101392_02822)	rarA	2734305..2735570 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
S101392_RS14195 (S101392_02823)	tcdA	2735610..2736374 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
S101392_RS14205 (S101392_02824)	aspS	2736710..2738488 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
S101392_RS14210 (S101392_02825)	hisS	2738502..2739776 (-)	1275	WP_088326648.1	histidine--tRNA ligase	-
S101392_RS14215 (S101392_02826)	yrzK	2740157..2740327 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=198490 S101392_RS14190 WP_015714437.1 2734305..2735570(+) (rarA) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=198490 S101392_RS14190 WP_015714437.1 2734305..2735570(+) (rarA) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998