Detailed information NTG0198064

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: BI283_RS06300
• Genome accession: NZ_CP017430
• Coordinates: 1343118..1345532 (+)
• Length: 804 a.a.
• NCBI ID: WP_105966605.1
• Uniprot ID: -
• Organism: Staphylococcus simulans strain MR4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1338118..1350532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BI283_RS06275 (BI283_06240)	-	1338599..1338805 (+)	207	WP_002481109.1	CsbD family protein	-
BI283_RS06280 (BI283_06245)	-	1338901..1339905 (-)	1005	WP_002481108.1	LLM class flavin-dependent oxidoreductase	-
BI283_RS06285 (BI283_06250)	-	1340088..1341230 (+)	1143	WP_106421009.1	cysteine desulfurase family protein	-
BI283_RS06290 (BI283_06255)	mnmA	1341233..1342345 (+)	1113	WP_002481106.1	tRNA 2-thiouridine(34) synthase MnmA	-
BI283_RS06295 (BI283_06260)	-	1342447..1343115 (+)	669	WP_002481105.1	tetratricopeptide repeat protein	-
BI283_RS06300 (BI283_06265)	recD2	1343118..1345532 (+)	2415	WP_105966605.1	ATP-dependent RecD-like DNA helicase	Machinery gene
BI283_RS06305 (BI283_06270)	alaS	1345843..1348473 (+)	2631	WP_105966604.1	alanine--tRNA ligase	-
BI283_RS06310 (BI283_06275)	-	1348542..1348805 (+)	264	WP_023015119.1	IreB family regulatory phosphoprotein	-
BI283_RS06315 (BI283_06280)	ruvX	1348809..1349234 (+)	426	WP_002481101.1	Holliday junction resolvase RuvX	-
BI283_RS06320 (BI283_06285)	-	1349259..1349570 (+)	312	WP_002481100.1	DUF1292 domain-containing protein	-
BI283_RS06325 (BI283_06290)	-	1349813..1350454 (+)	642	WP_023015120.1	O-methyltransferase	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 90609.98 Da
• Isoelectric Point: 4.5138

>NTDB_id=198064 BI283_RS06300 WP_105966605.1 1343118..1345532(+) (recD2) [Staphylococcus simulans strain MR4]
MENPTLFDYSMVKGTVEAILFQNKDNFYTVLKVDPIETNEDFDNMPTIVGFFPEIAEGDVYTFKGQAVTHPRYGKQLKAE
TFEKEVPQTKDAIISYLSSDLFKGVGKKTAENIVNTLGENTINKILDDRSVLEEVPNLSKKKQSQIADQIYSNQEVEKIM
IRLHDLGFGPKLAMSIYQVYQSDTLQTIEKNPYDLVYDVRGVGFHKADTLAKNLGIEYNAPERLKAGLLYTIEEECIKQG
HTFLPKDYVLETSLEMLSKGYDQTIDVSMLEKVILELTEESKLVEADETLSIPSLYYSEVKSVQNLYRIASHQAKLENIE
QSDLQINIGEIEEMNGVNYASSQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYSETHGLSLSYDDYQEDDYPIALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQDTKPEDVLENEITAKLIIIDEMSMVDTWLFHQFLNAVPIDAQIILVGDEDQ
LPSVGPGQVFKDLIDAKVIPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITERFHDRSFIPCTAEQIPDVVNKVVSSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKAEDAREIEFGEAVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
ARENELNKDILVVDFEGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPIVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMKTHGQVRMTRLAQLLRDYFGHESETNEEQADEQINDQTTSAPAQQLVELTEATIYEIDPMIGMGKVTPYT
FNHE

Nucleotide

• Length: 2415 bp

>NTDB_id=198064 BI283_RS06300 WP_105966605.1 1343118..1345532(+) (recD2) [Staphylococcus simulans strain MR4]
TTGGAGAACCCTACATTGTTTGACTATTCGATGGTCAAAGGAACAGTAGAAGCAATCTTATTTCAAAATAAAGATAATTT
CTATACCGTATTAAAAGTAGATCCGATTGAAACCAATGAAGATTTTGATAATATGCCTACAATTGTGGGGTTCTTTCCTG
AAATTGCTGAAGGCGATGTTTATACCTTCAAAGGTCAAGCTGTGACACACCCTAGATACGGCAAACAATTAAAAGCTGAA
ACTTTCGAAAAAGAAGTACCGCAAACAAAAGATGCGATTATCAGTTACTTATCAAGTGATTTGTTTAAAGGTGTCGGTAA
GAAAACGGCTGAAAATATCGTAAATACACTTGGTGAAAATACCATCAATAAAATTTTAGATGATCGTTCAGTCCTAGAAG
AAGTACCGAATTTATCTAAAAAGAAACAAAGCCAAATCGCAGATCAAATCTACAGTAATCAAGAAGTAGAAAAAATTATG
ATCAGACTTCATGATTTAGGCTTCGGTCCGAAATTAGCGATGAGCATCTATCAAGTTTATCAAAGTGACACCTTACAAAC
GATAGAGAAAAATCCATATGATCTTGTCTATGATGTACGCGGTGTCGGTTTCCACAAAGCAGATACTTTAGCTAAGAATT
TAGGCATAGAATATAACGCCCCTGAACGCTTAAAAGCAGGTCTGCTTTATACGATAGAAGAAGAATGTATTAAACAAGGT
CATACATTTTTACCTAAAGATTATGTATTAGAAACTTCGTTAGAGATGTTAAGCAAGGGATATGACCAAACGATAGATGT
CAGTATGTTAGAAAAAGTGATACTTGAATTGACAGAAGAAAGTAAGTTGGTGGAAGCGGATGAAACACTTTCTATCCCAA
GCTTATATTATTCAGAAGTCAAAAGTGTGCAGAATCTGTATCGTATTGCGTCACATCAAGCTAAATTAGAGAATATTGAA
CAATCTGACTTACAAATCAATATTGGTGAAATCGAGGAAATGAATGGAGTCAACTACGCATCTTCTCAAAAAGAAGCACT
TGAAACTGCGATTAATTCAAAAGTTATGCTGCTGACAGGTGGTCCAGGTACCGGTAAAACAACGGTTATCAAAGGCATCG
TTGAACTCTATTCGGAAACGCATGGTTTATCCTTATCCTATGACGATTACCAAGAAGATGATTATCCGATAGCGCTTGCT
GCACCTACAGGACGTGCAGCCAAACGTTTACAAGAATCGACTGGACTTGAAGCAATGACTATCCACCGTTTAATCGGCTG
GAGTCAAGATACCAAGCCTGAAGATGTCTTAGAAAATGAAATTACTGCTAAGCTCATCATTATTGATGAAATGTCAATGG
TAGATACATGGTTGTTTCATCAGTTCTTGAATGCAGTACCGATTGATGCACAAATCATTTTAGTCGGAGATGAAGACCAA
TTACCATCAGTCGGCCCAGGACAAGTCTTTAAAGATTTAATTGATGCGAAAGTCATTCCACGTGTTAATTTAACTGAAGT
CTACCGTCAACAAGATGGTTCTAGTATCATTGAACTCGCACATAAAATGAAATTAGGTCAGCCGATAGACATTACTGAGC
GATTCCATGATCGCAGCTTTATTCCTTGTACAGCTGAACAAATACCAGATGTAGTTAATAAAGTAGTGAGTTCTGCTGTT
AAAAAAGGCTACGATATGAGCGATATTCAAGTCTTGGCTCCGATGTATCGCGGCAGTGCCGGCATTAAGCGTTTAAATAA
AGTATTACAAGATATCTTGAATCCTAAAGCTGAAGATGCAAGAGAGATTGAGTTCGGAGAAGCGGTCTTTAGAAAGGGCG
ACAAAGTCTTACAACTCGTGAATCGCCCTAATGATAATATTTTCAATGGTGATATCGGTGTGATTGTCGGTATCTTCTGG
GCACGAGAAAACGAATTAAATAAAGATATACTTGTCGTTGATTTTGAAGGCAATGAAATTACATTTACCAAACAAGATAT
GATGGAGTTAACACATGCCTATTGTACTTCTATTCACAAAGCACAAGGTTCAGAGTTTCCAATTGTTATTATGCCGATTG
TAAAACAATATTATCGCATGTTGCAGCGTCCGATTATCTATACAGGACTTACACGTGCCAAACAATCTTTAGTTTTTCTT
GGTGACAGCCAAGCCTTTGACATCGGTATGAAGACCCATGGCCAAGTTCGTATGACGAGACTCGCACAATTGCTCAGAGA
TTACTTCGGTCATGAGAGTGAAACAAATGAAGAACAAGCAGATGAACAAATAAATGATCAAACAACCTCAGCACCTGCAC
AACAACTCGTAGAATTAACAGAAGCAACGATTTATGAAATTGACCCGATGATTGGTATGGGTAAGGTCACACCTTATACT
TTTAATCATGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• AAA domain (AAA_30) (339-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.687	99.378	0.494