Detailed information NTG0197811

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: S100761_RS06455
• Genome accession: NZ_CP021889
• Coordinates: 1236975..1237892 (+)
• Length: 305 a.a.
• NCBI ID: WP_003232954.1
• Uniprot ID: A0A9W5LHY5
• Organism: Bacillus subtilis subsp. subtilis strain SRCM100761
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1231975..1242892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100761_RS06440 (S100761_01271)	trpS	1232556..1233548 (-)	993	WP_046160356.1	tryptophan--tRNA ligase	-
S100761_RS06445 (S100761_01272)	oppA	1234292..1235929 (+)	1638	WP_021479550.1	oligopeptide ABC transporter substrate-binding protein OppA	-
S100761_RS06450 (S100761_01273)	oppB	1236036..1236971 (+)	936	WP_014479444.1	oligopeptide ABC transporter permease OppB	-
S100761_RS06455 (S100761_01274)	amiD	1236975..1237892 (+)	918	WP_003232954.1	oligopeptide ABC transporter permease OppC	Regulator
S100761_RS06460 (S100761_01275)	oppD	1237897..1238973 (+)	1077	WP_087614502.1	oligopeptide ABC transporter ATP-binding protein OppD	-
S100761_RS06465 (S100761_01276)	oppF	1238975..1239892 (+)	918	WP_003239287.1	oligopeptide ABC transporter ATP-binding protein OppF	-
S100761_RS06470 (S100761_01277)	yjbB	1239999..1241216 (+)	1218	WP_087614503.1	MFS transporter	-
S100761_RS06475 (S100761_01278)	yjbC	1241380..1241958 (+)	579	WP_003224597.1	GNAT family N-acetyltransferase	-
S100761_RS06480 (S100761_01279)	spx	1242139..1242534 (+)	396	WP_014476435.1	transcriptional regulator Spx	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33621.12 Da
• Isoelectric Point: 10.2873

>NTDB_id=197811 S100761_RS06455 WP_003232954.1 1236975..1237892(+) (amiD) [Bacillus subtilis subsp. subtilis strain SRCM100761]
MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIIIVLIILMAIFAPMFSRYDYSTTNLLNADKPP
SKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMV
VLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEA
FLSYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=197811 S100761_RS06455 WP_003232954.1 1236975..1237892(+) (amiD) [Bacillus subtilis subsp. subtilis strain SRCM100761]
ATGCAGAACATTCCAAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGGCGATGCAGAAAAAATAAGTAAAAAGAGCCT
TTCCCTCTGGAAAGATGCGATGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATCATTATCGTACTTATTA
TCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATGATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCGCCT
TCAAAAGATCACTGGTTCGGAACAGATGATCTTGGACGGGACATTTTCGTCCGTACATGGGTAGGGGCGCGAATCTCAAT
CTTTATCGGTGTTGCAGCCGCTGTTCTTGATTTGCTGATCGGTGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGCA
GAACGGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTT
GTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGG
ACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTTGCATCACAGACACTGGGTGCAAAAACATCCCGTCTTCTGTTTA
AACATATCGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTCCTACTGCAATTTTCACAGAAGCC
TTTTTAAGCTATTTGGGACTTGGTGTTCCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGCATT
GACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCATTACAATGTTTGGTTTCAACGTTGTCGGCGACG
GATTAAGAGACGCATTGGATCCTAAGTTACGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-79)

3D structure

• AlphaFold DB: A0A9W5LHY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	35.922	100	0.364
amiD	Streptococcus thermophilus LMD-9	35.922	100	0.364