Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BB164_RS06460 Genome accession   NZ_CP021867
Coordinates   1195216..1196949 (-) Length   577 a.a.
NCBI ID   WP_000647640.1    Uniprot ID   Q8DZN1
Organism   Streptococcus agalactiae strain SG-M25     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1190216..1201949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB164_RS06435 (BB164_06420) coaC 1190518..1191060 (+) 543 WP_000595814.1 phosphopantothenoylcysteine decarboxylase -
  BB164_RS06440 (BB164_06425) - 1191106..1191678 (+) 573 WP_000728786.1 ECF transporter S component -
  BB164_RS06445 (BB164_06430) - 1191788..1193506 (+) 1719 WP_088196770.1 phospho-sugar mutase -
  BB164_RS06450 (BB164_06435) - 1193578..1194923 (+) 1346 WP_370862946.1 IS3-like element IS861 family transposase -
  BB164_RS06455 (BB164_06440) - 1195005..1195202 (-) 198 WP_000746856.1 hypothetical protein -
  BB164_RS06460 (BB164_06445) rcrQ 1195216..1196949 (-) 1734 WP_000647640.1 ABC transporter ATP-binding protein Regulator
  BB164_RS06465 (BB164_06450) - 1196950..1198671 (-) 1722 WP_000826931.1 ABC transporter ATP-binding protein -
  BB164_RS06470 (BB164_06455) - 1198683..1199285 (-) 603 WP_000472259.1 lysozyme family protein -
  BB164_RS06475 (BB164_06460) - 1199287..1200264 (-) 978 WP_000968655.1 nucleoid-associated protein -
  BB164_RS06480 (BB164_06465) glyA 1200269..1201525 (-) 1257 WP_000575546.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 64304.10 Da        Isoelectric Point: 8.1077

>NTDB_id=197334 BB164_RS06460 WP_000647640.1 1195216..1196949(-) (rcrQ) [Streptococcus agalactiae strain SG-M25]
MKASHPKKIQKKLVQDLLSKKSLVGMALLGTVVQVCLTVYLPVLIGQAVDVVLSPHSMILLLPIMWKMIAVILANTIIQW
INPLLYNRLIFHYVASLRKAVMEKLNLLPIAYLDKRGIGDLISRVTTDTEQLSNGLLMVFNQFFVGLLTIIVTIFSMAKI
DLLMLFLVLFLTPLSLFLARFIAKKSYHLYQNQTASRGRQTQFIEEMVSQESLIQAFSAQEESSDHFRTINQEYANFSQS
AIFYSSTVNPSTRFINSLIYGFLAGIGALRIMSGAFSVGQLITFLNYVNQYTKPFNDISSVLSEMQSALACAERLYSILE
ESSPNITGTEKLDSSTVKGQIDFKNVVFGYNKSKLLLNGINLHIPAGAKVAIVGPTGAGKSTLINLIMRFYEVDGGNILL
DCKPITDYEPSQLRQEIGMVLQETWLKSATIHDNIAYANPKASREEVIEAAKAANADFFIKQLPNGYDTYLEDAGDSLSQ
GQCQLLTIARIFLKLPRILILDEATSSIDTRTEVLVQEAFQMLMKGRTSFIIAHRLSTIQTADIILVMVSGEIVEVGNHS
ELMAQKGIYYQMQNAQK

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=197334 BB164_RS06460 WP_000647640.1 1195216..1196949(-) (rcrQ) [Streptococcus agalactiae strain SG-M25]
ATGAAAGCAAGTCATCCTAAAAAGATACAAAAAAAGCTTGTTCAAGATCTTCTTTCTAAAAAAAGCTTAGTAGGAATGGC
ATTATTAGGGACGGTTGTACAAGTTTGCCTCACTGTTTATTTGCCTGTTCTAATTGGACAAGCGGTAGACGTTGTATTAT
CGCCTCATTCTATGATATTATTGTTACCTATAATGTGGAAGATGATTGCAGTCATTTTAGCAAATACTATTATTCAATGG
ATTAATCCTCTGCTCTATAACCGCTTAATTTTTCATTATGTTGCTTCTTTAAGAAAGGCTGTAATGGAAAAGTTGAATCT
ATTGCCTATAGCTTACCTTGATAAACGTGGCATAGGTGACTTGATTAGTCGTGTGACTACCGATACGGAGCAATTATCAA
ATGGTTTATTAATGGTTTTTAACCAGTTCTTTGTTGGTTTATTAACTATTATAGTTACTATTTTTAGTATGGCAAAGATT
GATTTATTAATGCTTTTTTTGGTATTATTTCTGACGCCTTTATCACTCTTTCTAGCCCGCTTTATTGCTAAAAAGAGTTA
TCACTTATATCAAAATCAAACGGCATCACGAGGACGACAAACTCAATTCATTGAAGAGATGGTGAGTCAAGAAAGCCTTA
TTCAAGCATTCAGTGCGCAAGAAGAAAGTAGTGATCATTTTAGGACTATTAATCAAGAGTATGCTAACTTTTCTCAATCA
GCAATTTTTTATTCTTCAACTGTCAATCCATCAACCCGATTTATCAATAGTTTGATTTATGGCTTCTTAGCTGGGATTGG
TGCCCTTCGCATTATGTCAGGGGCTTTTAGTGTTGGTCAATTAATCACTTTCTTAAATTATGTCAATCAATATACTAAGC
CATTTAATGACATCTCTTCCGTCCTGTCTGAGATGCAAAGTGCTCTGGCGTGTGCAGAACGCCTTTACTCTATTTTAGAA
GAATCGTCACCAAATATAACAGGTACAGAAAAACTTGATTCATCAACGGTCAAAGGTCAAATCGATTTTAAAAACGTTGT
TTTTGGTTATAATAAATCAAAACTACTATTGAATGGTATTAATTTACACATTCCAGCAGGAGCTAAGGTCGCTATTGTAG
GACCAACAGGTGCTGGGAAGTCTACTTTAATCAATTTAATAATGCGTTTCTATGAAGTTGACGGGGGAAATATCCTTTTA
GATTGTAAGCCTATTACTGATTATGAGCCATCACAATTAAGGCAAGAAATTGGAATGGTATTACAAGAAACGTGGTTAAA
AAGTGCTACGATTCACGATAACATTGCATATGCCAATCCTAAAGCTAGCCGTGAAGAAGTGATAGAGGCTGCAAAAGCAG
CTAATGCAGATTTCTTTATCAAACAATTACCGAATGGATATGATACGTATTTAGAAGATGCTGGAGATTCGTTATCACAG
GGGCAATGTCAGCTATTGACAATTGCTCGTATTTTTCTTAAATTACCTAGAATATTGATATTAGATGAGGCGACATCGTC
TATAGATACTCGTACTGAAGTTCTTGTTCAAGAAGCATTCCAAATGTTGATGAAGGGGAGAACAAGCTTTATTATTGCAC
ATCGCTTATCTACCATTCAAACGGCAGATATTATTTTAGTTATGGTATCTGGTGAAATTGTAGAAGTGGGTAACCACTCT
GAATTAATGGCTCAAAAAGGTATTTATTATCAAATGCAAAATGCACAAAAGTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-294)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZN1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.814

97.92

0.36