Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | A4W87_RS07150 | Genome accession | NZ_CP017273 |
| Coordinates | 1402012..1402707 (-) | Length | 231 a.a. |
| NCBI ID | WP_147658291.1 | Uniprot ID | - |
| Organism | Latilactobacillus sakei strain TMW 1.1396 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1397012..1407707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4W87_RS07140 (A4W87_07100) | secA | 1398728..1401091 (-) | 2364 | WP_011374203.1 | preprotein translocase subunit SecA | - |
| A4W87_RS07145 (A4W87_07105) | raiA | 1401340..1401885 (-) | 546 | WP_056948836.1 | ribosome-associated translation inhibitor RaiA | - |
| A4W87_RS07150 (A4W87_07110) | comFC | 1402012..1402707 (-) | 696 | WP_147658291.1 | ComF family protein | Machinery gene |
| A4W87_RS07155 (A4W87_07115) | comFA | 1402683..1404020 (-) | 1338 | WP_056948838.1 | DEAD/DEAH box helicase | Machinery gene |
| A4W87_RS07160 (A4W87_07120) | - | 1404082..1404747 (+) | 666 | WP_076632199.1 | YigZ family protein | - |
| A4W87_RS07165 (A4W87_07125) | - | 1404773..1405861 (-) | 1089 | WP_056948881.1 | MraY family glycosyltransferase | - |
| A4W87_RS07170 (A4W87_07130) | rny | 1406012..1407577 (-) | 1566 | WP_076632200.1 | ribonuclease Y | - |
Sequence
Protein
Download Length: 231 a.a. Molecular weight: 26933.39 Da Isoelectric Point: 9.4488
>NTDB_id=197232 A4W87_RS07150 WP_147658291.1 1402012..1402707(-) (comFC) [Latilactobacillus sakei strain TMW 1.1396]
MAITINCLMCQNVIIEKPSIKQLLQLKPLLKPHICQICLQQFEPISGNQCSDCSRPLLTGILCSDCQHWRQLYPQQHFKN
QALFTYNRAMQLYFQRYKGQGDYQLRLLFERDIQTRFPVKPNVAYVPIPSDEQHQQARGFNPVQGLFENCFPLMSLLKKR
PTEKGQAQKNRAERLASPQFFELIPQKLPDKLQSITILDDIYTTGRTLWHAQQCLRARYPQITINAITLAR
MAITINCLMCQNVIIEKPSIKQLLQLKPLLKPHICQICLQQFEPISGNQCSDCSRPLLTGILCSDCQHWRQLYPQQHFKN
QALFTYNRAMQLYFQRYKGQGDYQLRLLFERDIQTRFPVKPNVAYVPIPSDEQHQQARGFNPVQGLFENCFPLMSLLKKR
PTEKGQAQKNRAERLASPQFFELIPQKLPDKLQSITILDDIYTTGRTLWHAQQCLRARYPQITINAITLAR
Nucleotide
Download Length: 696 bp
>NTDB_id=197232 A4W87_RS07150 WP_147658291.1 1402012..1402707(-) (comFC) [Latilactobacillus sakei strain TMW 1.1396]
ATGGCGATTACAATCAACTGTTTAATGTGTCAAAATGTCATTATTGAAAAGCCAAGTATTAAACAACTGCTACAACTAAA
ACCACTACTTAAACCGCATATCTGTCAAATTTGTTTACAGCAGTTTGAACCTATCAGTGGCAACCAGTGTTCGGATTGTA
GTCGGCCACTATTGACGGGCATTTTATGTTCTGATTGTCAGCATTGGCGACAACTTTACCCCCAACAGCATTTTAAAAAT
CAAGCATTGTTTACTTATAATCGGGCGATGCAGTTATATTTTCAACGTTATAAGGGCCAAGGAGATTATCAATTACGGTT
ACTATTTGAACGGGACATTCAAACGCGGTTTCCAGTAAAGCCCAATGTAGCTTACGTGCCGATCCCATCCGATGAGCAAC
ATCAACAAGCACGCGGTTTTAATCCAGTCCAAGGCTTATTCGAAAATTGTTTTCCGCTAATGTCACTCTTGAAAAAGCGA
CCAACGGAAAAGGGGCAAGCGCAAAAAAATCGTGCAGAACGACTCGCAAGTCCGCAATTTTTTGAATTAATACCACAAAA
GTTACCTGATAAGCTACAGTCGATAACGATTCTAGATGATATTTACACGACCGGTCGAACGTTGTGGCATGCTCAGCAAT
GTCTGCGTGCTCGTTATCCGCAAATTACAATTAATGCAATTACTTTGGCCAGATAG
ATGGCGATTACAATCAACTGTTTAATGTGTCAAAATGTCATTATTGAAAAGCCAAGTATTAAACAACTGCTACAACTAAA
ACCACTACTTAAACCGCATATCTGTCAAATTTGTTTACAGCAGTTTGAACCTATCAGTGGCAACCAGTGTTCGGATTGTA
GTCGGCCACTATTGACGGGCATTTTATGTTCTGATTGTCAGCATTGGCGACAACTTTACCCCCAACAGCATTTTAAAAAT
CAAGCATTGTTTACTTATAATCGGGCGATGCAGTTATATTTTCAACGTTATAAGGGCCAAGGAGATTATCAATTACGGTT
ACTATTTGAACGGGACATTCAAACGCGGTTTCCAGTAAAGCCCAATGTAGCTTACGTGCCGATCCCATCCGATGAGCAAC
ATCAACAAGCACGCGGTTTTAATCCAGTCCAAGGCTTATTCGAAAATTGTTTTCCGCTAATGTCACTCTTGAAAAAGCGA
CCAACGGAAAAGGGGCAAGCGCAAAAAAATCGTGCAGAACGACTCGCAAGTCCGCAATTTTTTGAATTAATACCACAAAA
GTTACCTGATAAGCTACAGTCGATAACGATTCTAGATGATATTTACACGACCGGTCGAACGTTGTGGCATGCTCAGCAAT
GTCTGCGTGCTCGTTATCCGCAAATTACAATTAATGCAATTACTTTGGCCAGATAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Latilactobacillus sakei subsp. sakei 23K |
91.549 |
61.472 |
0.563 |