Detailed information NTG0195693

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: BS16045_RS08780
• Genome accession: NZ_CP017112
• Coordinates: 1664862..1665641 (+)
• Length: 259 a.a.
• NCBI ID: WP_003220850.1
• Uniprot ID: G4NSM6
• Organism: Bacillus subtilis strain BS16045
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1659862..1670641

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS16045_RS08760 (BS16045_01718)	trmFO	1660555..1661862 (+)	1308	WP_015715883.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
BS16045_RS08765 (BS16045_01719)	xerC	1661930..1662844 (+)	915	WP_003231988.1	tyrosine recombinase XerC	-
BS16045_RS08770 (BS16045_01720)	clpQ	1662857..1663402 (+)	546	WP_003238555.1	ATP-dependent protease subunit ClpQ	-
BS16045_RS08775 (BS16045_01721)	hslU	1663419..1664822 (+)	1404	WP_003245556.1	HslU--HslV peptidase ATPase subunit	-
BS16045_RS08780 (BS16045_01722)	codY	1664862..1665641 (+)	780	WP_003220850.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
BS16045_RS08785 (BS16045_01723)	flgB	1666021..1666410 (+)	390	WP_003245656.1	flagellar basal body rod protein FlgB	-
BS16045_RS08790 (BS16045_01724)	flgC	1666410..1666862 (+)	453	WP_003245521.1	flagellar basal body rod protein FlgC	-
BS16045_RS08795 (BS16045_01725)	fliE	1666873..1667193 (+)	321	WP_003238544.1	flagellar hook-basal body complex protein FliE	-
BS16045_RS08800 (BS16045_01726)	fliF	1667239..1668849 (+)	1611	WP_010886506.1	flagellar basal-body MS-ring/collar protein FliF	-
BS16045_RS08805 (BS16045_01727)	fliG	1668862..1669878 (+)	1017	WP_003231981.1	flagellar motor switch protein FliG	-
BS16045_RS08810 (BS16045_01728)	fliH	1669871..1670623 (+)	753	WP_003244804.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29013.22 Da
• Isoelectric Point: 4.6514

>NTDB_id=195693 BS16045_RS08780 WP_003220850.1 1664862..1665641(+) (codY) [Bacillus subtilis strain BS16045]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=195693 BS16045_RS08780 WP_003220850.1 1664862..1665641(+) (codY) [Bacillus subtilis strain BS16045]
ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGCGGCAGGGAAACCGGTAAACTTCAAGGAAAT
GGCGGAGACGCTGCGGGATGTAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGGTATTCTATTA
ACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGAGGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTT
AATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCA
AGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATC
AATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAA
GAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAAT
TGAGCACATTTTTGAGGAGCTTGACGGAAACGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTAGGCATTACCC
GTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGATCATTAGGAATGAAAGGTACT
TATATCAAGGTACTAAACAACAAATTCCTAATTGAATTAGAAAATCTAAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: G4NSM6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	100	100	1
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467