Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   MTVDSCj13_RS06845 Genome accession   NZ_CP017032
Coordinates   1310088..1310603 (-) Length   171 a.a.
NCBI ID   WP_002875272.1    Uniprot ID   A0A5T0KSE7
Organism   Campylobacter jejuni subsp. jejuni strain MTVDSCj13     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1305088..1315603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTVDSCj13_RS06830 (MTVDSCj13_1333) - 1305204..1307017 (-) 1814 Protein_1315 motility associated factor glycosyltransferase family protein -
  MTVDSCj13_RS06835 (MTVDSCj13_1334) - 1307014..1308837 (-) 1824 WP_069360424.1 motility associated factor glycosyltransferase family protein -
  MTVDSCj13_RS06840 (MTVDSCj13_1335) - 1308847..1310088 (-) 1242 WP_032586798.1 DUF2920 family protein -
  MTVDSCj13_RS06845 (MTVDSCj13_1336) ctsG 1310088..1310603 (-) 516 WP_002875272.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  MTVDSCj13_RS06850 (MTVDSCj13_1337) tsaD 1310604..1311611 (-) 1008 WP_032583832.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  MTVDSCj13_RS06855 (MTVDSCj13_1338) - 1311608..1313002 (-) 1395 WP_032586800.1 M99 family carboxypeptidase catalytic domain-containing protein -
  MTVDSCj13_RS06860 (MTVDSCj13_1339) dxr 1313004..1314074 (-) 1071 WP_002859634.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  MTVDSCj13_RS06865 (MTVDSCj13_1340) cdsA 1314071..1314796 (-) 726 WP_032586801.1 phosphatidate cytidylyltransferase -
  MTVDSCj13_RS06870 (MTVDSCj13_1341) - 1314805..1315143 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4682

>NTDB_id=194684 MTVDSCj13_RS06845 WP_002875272.1 1310088..1310603(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain MTVDSCj13]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=194684 MTVDSCj13_RS06845 WP_002875272.1 1310088..1310603(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain MTVDSCj13]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATTAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0KSE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment