Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   S101267_RS04515 Genome accession   NZ_CP021505
Coordinates   867633..869450 (+) Length   605 a.a.
NCBI ID   WP_013351419.1    Uniprot ID   A0A9P1NGJ9
Organism   Bacillus amyloliquefaciens strain SRCM101267     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 862633..874450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101267_RS04505 (S101267_00907) - 863314..865638 (+) 2325 WP_014471580.1 peptidase G2 autoproteolytic cleavage domain-containing protein -
  S101267_RS04510 (S101267_00908) - 865919..867652 (+) 1734 WP_013351418.1 ABC transporter ATP-binding protein -
  S101267_RS04515 (S101267_00909) rcrQ 867633..869450 (+) 1818 WP_013351419.1 ABC transporter ATP-binding protein Regulator
  S101267_RS04520 (S101267_00910) - 869617..870021 (+) 405 WP_013351420.1 DoxX family protein -
  S101267_RS04525 (S101267_00911) - 870038..870895 (+) 858 WP_014469921.1 VOC family protein -
  S101267_RS04530 cyoE 871185..872131 (+) 947 Protein_845 heme o synthase -
  S101267_RS04535 (S101267_00914) - 872167..872718 (-) 552 WP_013351422.1 PadR family transcriptional regulator -
  S101267_RS04540 (S101267_00915) - 872957..873559 (+) 603 WP_013351423.1 NAD(P)H-dependent oxidoreductase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 67564.29 Da        Isoelectric Point: 9.4318

>NTDB_id=193467 S101267_RS04515 WP_013351419.1 867633..869450(+) (rcrQ) [Bacillus amyloliquefaciens strain SRCM101267]
MQKDIRKPFRYPKIPLKSNEGGRKRAKAKDTKGTLRRIWSYVAEKKGLLSLVIIMVVISAIFGLLGPFVIGKAIDHFIVG
RTTDGLAGVLFILFGIYLVQSLSLWFQNYWMINISQSTVFKMRSELFTHLHELPIPFFDKQRLGDLMSRVTNDIENVSST
LNTSVIQVLSSVITFVGTIAVMLYMSPLLTLITLLIIPIMFLSIKWITSRTGLLFKQQQKNLGELNGFIEESISGAKVIK
AYSREDRVMEQFLEKNAALKSSGFWAQTISGFIPKVMNSLNNLSFTIIAAVGGLFALKGWISIGSIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEEHALYQPIKTGEIEFRDVSFGYQEDSLILKHLSFSVPQGQSIAFVGP
TGAGKTTVTSLIARFYEPNEGKILIDGTDIKKLTRSSLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDLEVEEAAKAAN
AHGFIERLPKGYDTVLTQNGAGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVKIQEALGRLMAGRTSVIIAHR
LNTIQKADQILVLKDGEMAEKGTHAELLSQNGFYRELYESQFRES

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=193467 S101267_RS04515 WP_013351419.1 867633..869450(+) (rcrQ) [Bacillus amyloliquefaciens strain SRCM101267]
GTGCAGAAAGACATTCGTAAACCTTTCCGATATCCGAAAATACCGCTCAAATCAAATGAAGGCGGCAGAAAACGCGCGAA
AGCAAAAGATACAAAAGGCACGCTGCGCAGGATCTGGTCTTATGTAGCCGAGAAAAAAGGGCTTTTGTCCCTCGTGATCA
TCATGGTAGTCATAAGCGCCATATTTGGCCTCCTCGGACCGTTCGTCATCGGGAAAGCGATTGATCATTTCATCGTCGGG
CGGACGACAGACGGATTGGCGGGGGTGCTGTTCATACTGTTTGGGATTTACCTCGTGCAATCATTGTCCTTATGGTTTCA
AAACTATTGGATGATCAATATTTCTCAAAGCACCGTGTTTAAAATGCGGAGCGAGCTGTTTACTCATCTGCATGAACTGC
CGATTCCGTTTTTTGATAAACAGCGGCTCGGCGACTTGATGAGCCGGGTCACCAATGATATTGAAAATGTCAGCTCCACT
TTAAATACATCAGTCATTCAGGTGCTGTCGAGCGTCATTACATTCGTCGGCACAATCGCCGTCATGCTGTACATGAGCCC
GCTTTTAACATTGATCACGCTCTTGATTATTCCGATCATGTTTTTGAGCATTAAATGGATCACCAGCCGGACGGGACTGC
TCTTTAAGCAGCAACAGAAAAACCTCGGCGAGCTGAACGGTTTTATTGAAGAGTCGATATCAGGAGCGAAAGTCATTAAA
GCCTACTCGAGGGAAGACCGCGTCATGGAGCAATTTTTAGAAAAAAACGCGGCGTTAAAATCATCGGGATTTTGGGCGCA
GACCATTTCGGGATTCATTCCGAAAGTAATGAACTCTTTAAACAATTTAAGCTTTACGATTATAGCGGCGGTCGGCGGGC
TGTTTGCGCTGAAAGGGTGGATCTCAATCGGTTCCATCGTCGTATTCGCCGAATACTCACGGCAGTTCACGCGCCCTCTG
AATGATTTAGCCAATCAGTTCAACACGATGTTATCGGCCATCGCCGGGGCTGAACGGGTGTTTGACGTGCTTGATGAAAA
AGAGGAGCGGGAAGACGAAGAGCATGCGCTGTACCAGCCGATCAAAACGGGAGAGATTGAATTCCGAGATGTCTCCTTCG
GCTATCAGGAAGACAGCCTGATCTTAAAACATCTGTCCTTCAGCGTTCCGCAAGGACAGTCAATCGCCTTTGTCGGCCCG
ACCGGAGCGGGTAAAACAACCGTCACAAGTCTGATCGCCCGCTTTTACGAGCCGAATGAAGGGAAAATTCTTATCGACGG
AACGGACATCAAAAAACTGACGAGATCCAGTCTGAGAAAAAATATGGGGTTTGTCCTGCAGGATTCATTTCTTTTTCAGG
GCACCATCAGGGAAAATATCCGCTACGGCCGCTTGGATGCATCTGACTTAGAGGTGGAGGAAGCCGCTAAAGCCGCCAAT
GCCCACGGATTCATTGAACGGCTCCCCAAAGGCTACGATACCGTTCTTACCCAAAACGGCGCGGGCATCAGCCAAGGCCA
AAAACAGCTCATTTCCATTGCGAGAGCTGTGCTGGCCGACCCGGTTCTGCTCATTTTGGATGAAGCGACAAGCAACATTG
ATACGGTGACGGAAGTGAAAATACAAGAAGCGCTCGGCCGTTTAATGGCGGGCAGAACAAGCGTCATCATCGCTCACAGG
CTGAATACGATTCAAAAAGCCGATCAGATTCTTGTGCTGAAAGACGGCGAAATGGCTGAAAAAGGAACCCATGCCGAACT
TCTCAGCCAGAACGGTTTTTACCGGGAATTATATGAAAGCCAGTTCAGGGAATCATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(50-320)

ABC transporter (ABC_tran)

(382-531)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9P1NGJ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.593

96.364

0.372