Detailed information NTG0193395

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: S100757_RS13930
• Genome accession: NZ_CP021499
• Coordinates: 2583381..2584646 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM100757
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2578381..2589646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100757_RS13910 (S100757_02760)	yrrB	2579752..2580372 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
S100757_RS13915 (S100757_02761)	mnmA	2580458..2581573 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
S100757_RS13920 (S100757_02762)	iscSA	2581604..2582743 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
S100757_RS13925 (S100757_02763)	cymR	2582762..2583178 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
S100757_RS13930 (S100757_02764)	rarA	2583381..2584646 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
S100757_RS13935 (S100757_02765)	tcdA	2584686..2585450 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
S100757_RS13945 (S100757_02766)	aspS	2585785..2587563 (-)	1779	WP_087614636.1	aspartate--tRNA ligase	-
S100757_RS13950 (S100757_02767)	hisS	2587577..2588851 (-)	1275	WP_087614637.1	histidine--tRNA ligase	-
S100757_RS13955 (S100757_02768)	yrzK	2589233..2589403 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=193395 S100757_RS13930 WP_014480427.1 2583381..2584646(+) (rarA) [Bacillus subtilis subsp. subtilis strain SRCM100757]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=193395 S100757_RS13930 WP_014480427.1 2583381..2584646(+) (rarA) [Bacillus subtilis subsp. subtilis strain SRCM100757]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993