Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | BE845_RS05085 | Genome accession | NZ_CP016874 |
| Coordinates | 1152521..1153228 (+) | Length | 235 a.a. |
| NCBI ID | WP_080020479.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila strain FFI329 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1147521..1158228
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE845_RS05070 (BE845_05070) | - | 1148132..1149613 (-) | 1482 | WP_011214855.1 | ArnT family glycosyltransferase | - |
| BE845_RS05075 (BE845_05075) | - | 1149907..1151256 (+) | 1350 | WP_080020481.1 | lpg0634 family Dot/Icm T4SS effector | - |
| BE845_RS05080 (BE845_05080) | - | 1151433..1152293 (+) | 861 | WP_011214853.1 | polysaccharide deacetylase family protein | - |
| BE845_RS05085 (BE845_05085) | fimT | 1152521..1153228 (+) | 708 | WP_080020479.1 | GspH/FimT family pseudopilin | Machinery gene |
| BE845_RS05090 (BE845_05090) | pilV | 1153241..1153780 (+) | 540 | WP_011214851.1 | type IV pilus modification protein PilV | - |
| BE845_RS05095 (BE845_05095) | - | 1153777..1154844 (+) | 1068 | WP_011214850.1 | PilW family protein | - |
| BE845_RS05100 (BE845_05100) | - | 1154841..1155353 (+) | 513 | WP_011214849.1 | pilus assembly protein | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24931.68 Da Isoelectric Point: 8.5054
>NTDB_id=193203 BE845_RS05085 WP_080020479.1 1152521..1153228(+) (fimT) [Legionella pneumophila subsp. pneumophila strain FFI329]
MNKVITESQKFTLRNITNMLFCVKSSVLPAQSNIAQKIQKKGIIYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTLRNITNMLFCVKSSVLPAQSNIAQKIQKKGIIYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=193203 BE845_RS05085 WP_080020479.1 1152521..1153228(+) (fimT) [Legionella pneumophila subsp. pneumophila strain FFI329]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATATACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCGC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGGGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATATACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCGC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGGGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
96.596 |
100 |
0.966 |