Detailed information NTG0192632

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: BFC20_RS05725
• Genome accession: NZ_CP016841
• Coordinates: 1202280..1204658 (+)
• Length: 792 a.a.
• NCBI ID: WP_069133303.1
• Uniprot ID: -
• Organism: Brochothrix thermosphacta strain TMW 2.1572
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1197280..1209658

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BFC20_RS05710 (BFC20_05670)	-	1198855..1199997 (+)	1143	WP_069126285.1	cysteine desulfurase family protein	-
BFC20_RS05715 (BFC20_05675)	mnmA	1200012..1201130 (+)	1119	WP_119904789.1	tRNA 2-thiouridine(34) synthase MnmA	-
BFC20_RS05720 (BFC20_05680)	-	1201596..1202258 (+)	663	WP_069118849.1	tetratricopeptide repeat protein	-
BFC20_RS05725 (BFC20_05685)	recD2	1202280..1204658 (+)	2379	WP_069133303.1	ATP-dependent RecD-like DNA helicase	Machinery gene
BFC20_RS13125	-	1204945..1205037 (-)	93	WP_420835515.1	putative holin-like toxin	-
BFC20_RS05730 (BFC20_05690)	-	1205226..1205774 (+)	549	WP_119904790.1	hypothetical protein	-
BFC20_RS05735 (BFC20_05695)	-	1206292..1206714 (+)	423	WP_119904791.1	organic hydroperoxide resistance protein	-
BFC20_RS05740 (BFC20_05700)	-	1206743..1207177 (+)	435	WP_029091222.1	MarR family winged helix-turn-helix transcriptional regulator	-
BFC20_RS05745 (BFC20_05705)	-	1207170..1207826 (+)	657	WP_029091223.1	nitroreductase family protein	-
BFC20_RS05750 (BFC20_05710)	-	1207830..1208204 (+)	375	WP_029091224.1	DUF1304 domain-containing protein	-
BFC20_RS05755 (BFC20_05715)	-	1208248..1208778 (-)	531	WP_029091225.1	hypothetical protein	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88511.86 Da
• Isoelectric Point: 4.8893

>NTDB_id=192632 BFC20_RS05725 WP_069133303.1 1202280..1204658(+) (recD2) [Brochothrix thermosphacta strain TMW 2.1572]
MTDTMNTSEGENIPPYVKGNVVTTIFHNATNLFSVLRMEVKESNVEWDDREIVITGYLPELSQEDRYHLEGTVSEHPKYG
RQFQVTTFRKEMPATKAGVSTYLSGEMFKGVGKKTAERIVDILGNDAISRILQDPTVLDQVPKLTTKLKESLAKTLQENE
GIELVMIKLNEMGFGPQLAMRIFQTYQQKTMEVINENPYQLIHDVTGIGFNRADELGQKIGMGGNHPSRLSAALMFTVDS
ESMQNGHVYMEYDETVLATKRLLLSSNGSSVIAENEISDALQELLQNNELVQEETRIYLPSLYHAEKGVAHHLMRLEKAQ
AKRTTFPKSEFLKALGELEERINVTYAPSQSDAIETALNSSTMILTGGPGTGKTTVIKGIVELFAELNGVSLDPSEYKDG
KTFPVVLAAPTGRAAKRMSESTNLPAMTIHRLLGMTGQENKSEDVDRDIEGQLLIIDETSMVDIWLANQLLRAVPTNMQV
IFVGDKDQLPSVGPGQFLKDILKSEVIPTISLTEIYRQAEGSSIIELAHHVKDGVLPADFTKNQSDRSFFRCNTQQLSEV
VGQVVKNAVKKGFTSKDIQVLIPMYRGPAGINKMNEELQEILNPNPEGKRKEITYGDVIYRVGDKVLQLVNQPESNVFNG
DMGTIVSIIYAKETVEKQDTLVIEFDQTEVTYLRGDLNQITHAYCCSVHKAQGSEFPIVILPLLKSYYRMLRRDILYTAM
TRSRQFLIMCGEEDAFAQATVRQSDVARQTSLFERLTRTTAELEPVNEAGEYILTPENIHSIDPMIGMVESP

Nucleotide

• Length: 2379 bp

>NTDB_id=192632 BFC20_RS05725 WP_069133303.1 1202280..1204658(+) (recD2) [Brochothrix thermosphacta strain TMW 2.1572]
ATGACGGATACAATGAACACATCAGAGGGTGAAAATATACCACCGTATGTTAAAGGCAATGTGGTCACCACCATCTTTCA
TAATGCCACTAACTTGTTTTCTGTGTTGCGTATGGAAGTGAAAGAAAGTAATGTCGAATGGGATGACCGTGAAATTGTCA
TCACCGGTTATCTACCAGAACTTTCACAAGAAGACCGTTATCATTTAGAAGGAACGGTATCAGAACATCCAAAGTATGGA
CGACAGTTTCAGGTCACAACTTTCAGAAAAGAAATGCCTGCTACTAAGGCGGGTGTTTCTACTTATTTATCTGGAGAAAT
GTTCAAAGGTGTCGGTAAAAAGACTGCTGAACGAATTGTCGATATACTAGGTAACGATGCAATTTCACGGATTTTACAAG
ATCCAACTGTGTTAGATCAAGTCCCAAAATTAACAACAAAATTAAAAGAATCATTAGCCAAAACACTTCAAGAAAATGAA
GGCATTGAATTGGTGATGATTAAACTTAATGAAATGGGATTTGGTCCTCAATTAGCGATGCGTATTTTTCAAACATACCA
ACAAAAAACGATGGAAGTTATTAATGAAAATCCGTATCAATTGATTCATGATGTCACAGGTATCGGCTTTAATCGTGCGG
ATGAACTGGGCCAAAAAATTGGTATGGGTGGTAATCATCCTTCTCGTTTAAGTGCAGCACTGATGTTTACAGTTGATTCG
GAAAGTATGCAAAACGGTCATGTTTATATGGAATATGATGAAACGGTATTAGCTACAAAGCGTTTATTATTAAGTAGTAA
TGGCTCTTCTGTCATTGCGGAAAATGAAATTAGTGACGCATTGCAAGAACTATTACAAAATAATGAGCTTGTGCAAGAAG
AGACACGTATCTATTTACCATCGTTGTATCATGCCGAAAAAGGTGTCGCACATCATTTAATGCGACTTGAAAAAGCACAG
GCGAAGCGTACAACTTTTCCGAAATCAGAGTTTTTAAAAGCGCTTGGTGAATTGGAAGAACGTATTAATGTAACGTATGC
ACCGTCTCAAAGTGATGCGATTGAAACAGCTTTAAATTCGTCAACAATGATTTTGACAGGTGGACCAGGTACAGGTAAAA
CAACTGTTATTAAAGGGATTGTTGAATTGTTTGCTGAATTAAATGGCGTTAGTCTAGATCCAAGTGAATATAAAGATGGA
AAAACATTCCCTGTCGTTTTGGCAGCACCCACGGGACGAGCAGCAAAACGTATGAGTGAATCGACTAATCTACCTGCGAT
GACAATTCATCGTTTATTGGGGATGACAGGTCAAGAAAATAAGTCTGAAGATGTTGATCGTGATATTGAAGGACAATTGC
TTATTATCGATGAAACAAGTATGGTTGATATTTGGCTAGCAAACCAACTGTTGCGAGCTGTGCCAACTAATATGCAGGTT
ATTTTTGTCGGTGATAAAGACCAGTTGCCATCAGTAGGGCCGGGTCAGTTTTTAAAAGATATTTTAAAATCAGAAGTCAT
TCCAACAATTTCGCTAACAGAAATTTATCGACAAGCAGAAGGCTCATCGATTATTGAATTGGCTCACCATGTAAAAGATG
GCGTTTTGCCTGCTGATTTTACTAAAAATCAGTCAGATCGTTCGTTTTTCCGTTGTAATACACAACAGTTGTCAGAAGTA
GTGGGGCAAGTGGTTAAAAATGCCGTGAAAAAAGGTTTTACTTCTAAGGATATTCAAGTGTTGATCCCGATGTATCGTGG
CCCTGCTGGAATTAATAAAATGAATGAAGAGCTGCAGGAAATTTTAAATCCTAACCCTGAGGGTAAGCGGAAAGAAATAA
CCTATGGCGATGTGATTTATCGTGTCGGTGATAAGGTGCTGCAACTTGTTAATCAGCCTGAGAGTAACGTTTTTAATGGT
GATATGGGAACAATTGTATCAATTATCTATGCGAAGGAAACCGTCGAAAAACAAGATACGCTTGTCATTGAATTTGATCA
AACAGAAGTGACATACTTACGCGGTGATTTGAACCAAATTACGCATGCCTATTGTTGCTCTGTGCATAAAGCACAAGGAT
CTGAATTCCCAATTGTTATTTTACCGTTATTAAAAAGTTATTATCGAATGTTACGCCGTGATATTTTATACACAGCGATG
ACTAGAAGTCGGCAATTTTTAATTATGTGTGGCGAAGAAGATGCCTTTGCGCAAGCGACAGTGAGGCAATCAGATGTTGC
ACGACAAACATCTTTATTTGAACGACTTACGCGTACAACTGCAGAATTAGAACCGGTGAATGAAGCAGGAGAATATATTT
TAACACCTGAAAATATTCATTCAATTGACCCAATGATTGGTATGGTAGAGAGTCCGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (346-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-665)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	55.613	97.854	0.544